Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01078 ATGAGACCCCCGAGAGGCggtggacgcggcggtggattcagaggtggccgcgacggtggCggtcgcggcagaggtggttttggtcgcggcggaggtggttttggtcgcggaggaggtggttttggtcgcggcGGCGGATTTCGCGACGAAGGACCACCCTCCGAAGTCGTAGAGGTGTCATCATTTATGCATGCATGCGAGGGAGACGCAGTGACAAAGCTTACAAATGAGAAAGTTCCCTTTTTCAATGCTCCTATATATCTGAAAAACATGACTCAGATTGGAAAAGTTGATGAAATATTTGGTCCCATCAATGAAGCTTACTTCTCAATTAAGATGATGGAAGGGATTGTTGCTACTTCTTATTCATCTGGCGACAAGTTTTATATTGATCCAAGGAAACTGTTGCCTCTTGCAAGATTTCTTCCTCAACCCAAGGGACAATCAGCTGGTAGAggtggaggtggaggaggtcgtggtggaggtagaggtggccgtggaggcggtggTTTTCGTGGAAGGGGCGGTCCAAGGGGTGGGAGAGGTGGTCCTCCTAGGGGTGGTGGTTTCAGGGGAAGGGGGAGATCATAG 591 0.3367 MRPPRGGGRGGGFRGGRDGGGRGRGGFGRGGGGFGRGGGGFGRGGGFRDEGPPSEVVEVSSFMHACEGDAVTKLTNEKVPFFNAPIYLKNMTQIGKVDEIFGPINEAYFSIKMMEGIVATSYSSGDKFYIDPRKLLPLARFLPQPKGQSAGRGGGGGGRGGGRGGRGGGGFRGRGGPRGGRGGPPRGGGFRGRGRS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01078 196 Pfam Gar1/Naf1 RNA binding region 56 142 IPR007504 GO:0001522|GO:0042254
Gma19g01078 196 Gene3D Probable tRNA pseudouridine synthase domain 52 143 IPR038664 -
Gma19g01078 196 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 195 - -
Gma19g01078 196 SUPERFAMILY Translation proteins 57 131 IPR009000 -
Gma19g01078 196 MobiDBLite consensus disorder prediction 1 54 - -
Gma19g01078 196 MobiDBLite consensus disorder prediction 143 196 - -
Gma19g01078 196 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01078 Gma-Chr19 38895868 38898094 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01078 K11128 - gmx:100788981 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01078 19 38895868 38898094 Gma19g01078 19 38895868 38898094 ECH
Gma19g01078 19 38895868 38898094 Gma16g00374 16 3914598 3916817 GST