Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00374 ATGAGACCCCCGAGAGGCGGTGGACGCGGCGGCGGATTCAGAGGTGGCCGCGACGGTGGtggtcgcggcagaggtggttttggtcgcggcggaggtggttttggtcgcggcggCGGCGGATATCGTGACGAAGGACCACCCTCCGAAGTCGTAGAGGTGTCATCTTTTATGCATGCATGCGAGGGAGATGCAGTGACAAAGCTTACAAATGAGAAAGTTCCCTTTTTCAATGCTCCTATTTATCTGAAAAACATGACTCAGATTGGGAAAGTTGATGAAATATTTGGCCCCATCAATGAAGCTTACTTCTCAATTAAGATGATGGAAGGGATTGTTGCTACTTCTTATTCATCCGGCGACAAGTTTTATATTGATCCAAGGAAACTGTTGCCTCTTGCAAGATTTCTTCCACAACCCAAGGGACAATCAGCTGGTAGAGGTGGTGGTGGAGGTGGTCGTGGTGGATTTAGAGGTGGCCGTGGAGGTGGTGGTTTTCGTGGAAGGGGGGCTCCAAGGGGTGGGAGAGGTGGTCCTCCCAGGGGTGGTGGACGAGGTGGTGGTTTCAGGGGAAGGGGGAGATCATAG 585 0.4684 MRPPRGGGRGGGFRGGRDGGGRGRGGFGRGGGGFGRGGGGYRDEGPPSEVVEVSSFMHACEGDAVTKLTNEKVPFFNAPIYLKNMTQIGKVDEIFGPINEAYFSIKMMEGIVATSYSSGDKFYIDPRKLLPLARFLPQPKGQSAGRGGGGGGRGGFRGGRGGGGFRGRGAPRGGRGGPPRGGGRGGGFRGRGRS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00374 194 MobiDBLite consensus disorder prediction 137 194 - -
Gma16g00374 194 MobiDBLite consensus disorder prediction 1 47 - -
Gma16g00374 194 Pfam Gar1/Naf1 RNA binding region 50 136 IPR007504 GO:0001522|GO:0042254
Gma16g00374 194 SUPERFAMILY Translation proteins 51 125 IPR009000 -
Gma16g00374 194 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 193 - -
Gma16g00374 194 Gene3D Probable tRNA pseudouridine synthase domain 46 137 IPR038664 -
Gma16g00374 194 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00374 Gma-Chr16 3914598 3916817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00374 K11128 - gmx:100799823 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01078 19 38895868 38898094 Gma16g00374 16 3914598 3916817 GST