Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01075 ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAAATTAAACTTAATAAAGGCCTCTTCAGCAGCTAACACCAATACAACAACCACTCTTCCCACAGCTGAGACACTCAATGAGAAATTTGGCAGGAAAGGCATCAAGTTCTTGGAGTCTGATAACATTCCCATAGTTGAGCTAACAGTGAGAAATGGCAGCTCCTTGAGGCTGAGGATACCTGATGCTCATGTGACATCATACAAACCAAAAGTTAATTGGAAAGATGATGGCTTCCAGGAGGTTCTTTACACAATTCCTGCAACTGAAACTGGCCCTTACAAGGCCAAAGGTGGGGTTGGTTTGGTCATGAATGAATTGCTGCAACCTGGAGCCAAAGGGTTGCTCCCTTCCACTTTGGAGTGGACTGTAAATGATGTTGATTCTGATTCCATTGATGCTCTCCAGCTTGAATTAAGCTGCACTAGTAGATTCTTTGACATCACATACATTGTGACCCTCTATCCTGTGAGCATGGCCACAGCAGTTGTAGCTAAGAACATAGGCCCCAAGCCTGCCACTCTAACCAATGCTATTCTAAGCCATTTTAGATTCAAGAAAAGAGGTGAAACAGCAATTCAAGGCCTCAGAAGCTGCTCATATATTCCACACGCTCCTCCATCTTCTCCCTTTCAAATCTTGACCCCATCAGAAGCTACCATATCTGAGCCTCCTAGATGGTTGTCCTTTGGTAATGAGCCTGAAGCCAAGCCCGGCACGTGGGGTCAGCAAGCTTTGTCTATTACCCTCCTTGAGAATAAGATGAGTAGAGTTTATGCTGCGCCTCCAAAGGAAAGATTAAAGGCATTCTATAACACCCCTCCCTCCAAGTATGAAACCATTGATCAGGGACGTGGGCTTTGCTTCAGGGTGATAAGAATGGGTTTTGAGGATATTTATTTATCAAGCCCTGGTTCCTTGTCAGAGAAATATGGAAAGGACTACTTCATCTGCACTGGCCCTGCTTCAATACTGGTGCCTGTGACTGTAAATCCTGGTGAAGAATGGAGAGGGGCACAAGTTATTGAGCATGATAATTTAACATGA 1074 0.4432 MASFLSLSLPKLNLIKASSAANTNTTTTLPTAETLNEKFGRKGIKFLESDNIPIVELTVRNGSSLRLRIPDAHVTSYKPKVNWKDDGFQEVLYTIPATETGPYKAKGGVGLVMNELLQPGAKGLLPSTLEWTVNDVDSDSIDALQLELSCTSRFFDITYIVTLYPVSMATAVVAKNIGPKPATLTNAILSHFRFKKRGETAIQGLRSCSYIPHAPPSSPFQILTPSEATISEPPRWLSFGNEPEAKPGTWGQQALSITLLENKMSRVYAAPPKERLKAFYNTPPSKYETIDQGRGLCFRVIRMGFEDIYLSSPGSLSEKYGKDYFICTGPASILVPVTVNPGEEWRGAQVIEHDNLT 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01075 357 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 17 356 - -
Gma19g01075 357 Gene3D - 53 357 IPR014718 GO:0030246
Gma19g01075 357 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 17 356 - -
Gma19g01075 357 SUPERFAMILY Galactose mutarotase-like 44 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01075 Gma-Chr19 38849472 38852177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01075 - - gmx:100788455 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01075 19 38849472 38852177 Gma19g01075 19 38849472 38852177 ECH
Gma19g01075 19 38849472 38852177 Gma16g00377 16 3943576 3946227 GST
Gma19g01075 19 38849472 38852177 Gma16g01396 16 32980127 32982775 PCT
Gma19g01075 19 38849472 38852177 Gma02g00649 02 6343125 6347690 PCT
Gma16g01396 16 32980127 32982775 Gma19g01075 19 38849472 38852177 PCT
Gma02g00649 02 6343125 6347690 Gma19g01075 19 38849472 38852177 PCT