Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00377 ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAAGTTAAACTTAATAAAGGCCTCTTCAGCAGCTAACACCACTACAACAACAACAACCACTCTTCCCACAGCTGAGACACTCAATGAGAAATTTGGCAGAAAAGGCATCAAGTTCTTGGAGTCTGATAACACTCCCATAGTTGACTTAACAGTGAGAAATGGCAGCTCCTTGAGGCTGAGGATACCTGATGCTCATGTGACATCATACAAACCAAAAGTTAATTGGAAAGATGATGGATTTCAGGAGGTTCTTTACACAATTCCTGCAACTGAAACTGGCCCTTACAAGGCCAAAGGTGGTGTTGGTTTGGTCATGAATGAAGTGCTACAACCTGGAGCCAAAGGGTTACTACCTTCCACTTTAGAGTGGACTGTAAATGATGTTGACTCTGATTCCATAGATGCTCTCCAGGTTGAATTGAGCTGCACTAGTAGATTCTTTGACATCACTTACATAGTGACCCTCTATCCTGTGAGTATGGCCACAGCAGTTGTAGCCAAGAACATTGGCCCCAAGCCTGCCACTCTAACCAATGCTATTCTAAGCCATTTTAGATTCAAGAACAGACGTGGGACAGCAATTAAAGGCCTCAGAAGCTGCTCATATATTCCACATGCTCCTCTTTCTTCTCCCTTTCAAATCTTGACTCCATCAGAAGCTACCATATCTGAGCCTCCTAGATGGCTTTCCTTTGGTAATGAGACTGAAGCCAAGCCTGGCACGTGGGGTCAGCAGGCTTTGTCTATTACCCTCCTTGAGAATAAGATGAGTAGAGTTTATGCTGCACCTCCAAAAGAAAGATTAAAGGCATTCTATAACACCCCTCCTTCCAAGTATGAAACCATTGACCAGGGACGTGGGCTATGCTTCAGGGTGATAAGAATGGGTTTTGAGGATATTTATTTATCAAGCCCTGGTTCCTTGTCAGAGAAATATGGAAAGGACTACTTCATCTGCACTGGCCCTGCTTCAATACTGGTGCCTGTGACTGTTAATCCTGGGGAAGAATGGAGAGGTGCACAAGTTATTGAGCATGATAATTTGACATGA 1080 0.437 MASFLSLSLPKLNLIKASSAANTTTTTTTTLPTAETLNEKFGRKGIKFLESDNTPIVDLTVRNGSSLRLRIPDAHVTSYKPKVNWKDDGFQEVLYTIPATETGPYKAKGGVGLVMNEVLQPGAKGLLPSTLEWTVNDVDSDSIDALQVELSCTSRFFDITYIVTLYPVSMATAVVAKNIGPKPATLTNAILSHFRFKNRRGTAIKGLRSCSYIPHAPLSSPFQILTPSEATISEPPRWLSFGNETEAKPGTWGQQALSITLLENKMSRVYAAPPKERLKAFYNTPPSKYETIDQGRGLCFRVIRMGFEDIYLSSPGSLSEKYGKDYFICTGPASILVPVTVNPGEEWRGAQVIEHDNLT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00377 359 Gene3D - 51 359 IPR014718 GO:0030246
Gma16g00377 359 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 17 358 - -
Gma16g00377 359 SUPERFAMILY Galactose mutarotase-like 64 353 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gma16g00377 359 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 17 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00377 Gma-Chr16 3943576 3946227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00377 - - gmx:100805680 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01075 19 38849472 38852177 Gma16g00377 16 3943576 3946227 GST
Gma16g00377 16 3943576 3946227 Gma16g01396 16 32980127 32982775 PCT
Gma16g00377 16 3943576 3946227 Gma02g00649 02 6343125 6347690 PCT
Gma16g01396 16 32980127 32982775 Gma16g00377 16 3943576 3946227 PCT
Gma02g00649 02 6343125 6347690 Gma16g00377 16 3943576 3946227 PCT