Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01046 ATGATTCCTCTGTCCCATAACCCAGTCTCTGTTCACCTGGGTGGAACACCCTGTGACTCTCTTCACCCAATTACGTTCCATCCAATTCTGAATAAGCCTCGTTCTTCTGCCTCTCTGTTTTGGAACTGCAAAAGGAGAAGGAAGAGGAAAAGCTCCATTACTATGGCTTCTAATCTCAGAACCAACAATTTCCTGCGCCATGTGGAATCAATGAAGCTTCTTCCATCAGGTGCGGGTCACATTTCACACTTGAATGCTGTGATACTTGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTGAGGACTTTGCTAGCCAAGCCAATGTTCAGTCCCCAGAACAGTATCTGAAGATGTATAATAGATCCATTGAGGATCCTGCTGGATTCTGGTCTGAGATTGCCTCAGAGTTCTATTGGAAACAGAGATGGGGTGATAAAGTGTGTGATGAAAATTTTGATGTGAGGAAAGGGAATATAAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAGGTTGCCATTTACTGGGAAGGCAATGAGCCTGGTTTGGATGGTACTTTGACATACACTGAACTTCTACAACAAGTTTGCCAGCTTGCAAACTACCTTAAAGATATTGGTGTGAAGAAGGGAGATGCCGTAATTATTTATTTGCCCATGCTTATGGAGCTTCCCATCGCAATGCTTGCTTGCGCCCGGATTGGTGCTGTTCATTCGGTTGTATTTGCTGGTTTTTCTGCAGAAGCTCTTTCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTTATTACTTGCAATGCTGTTAAAAGGGGCCCTAAGCCTATCTATCTAAAAGATATTGTTGATGCTGCAATCAATGATTCAGCCCAAAATGGGGTCTCTATAGATAAATGCCTAGTTTATGAAAACCCATTGGCAATGAAGAGGGTAGATACCAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTCATTCCTCAATATCCAACTACTTGTCCGTTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGCACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTTAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCATCTGTTATTGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGAGATGTTGGGACATTGTTGACAAATATAAGGTGACAATATTCTACACTGCTCCGACATTGGTGCGGTCTCTCATGCGTGATGGTGATGCGTTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTAGGAAGTGTAGGTGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACAGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAACCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATACTGGATGAGAAAGGTGTTGAAATAGAAGGGGAGTGCAATGGATATTTGTGTGTGAAGAAATCATGGCCTGGGGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCCGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCATTGGAAGAGTTGACGATGTCATCAATGTTAGTGGGCATCGAATTGGCACGGCAGAAGTGGAATCAGCTTTAGTTTCACATCCGCAATGTGCAGAGGCTGCTGTGGTTGGTGTGGAGCATGAGGTCAAAGGACAGGGCATCTATGCATTTGTTACAGTTGTGGATGGTGTTCCTTACAGTGAAGAACTGCGGAAGGACCTTGTACTCATAGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGATAAAATTCATTGGGCACCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGCGAAGAATTCTGAGAAAAATTGCGTCTCGGCAGCTGGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAATGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGA 2259 0.44 MIPLSHNPVSVHLGGTPCDSLHPITFHPILNKPRSSASLFWNCKRRRKRKSSITMASNLRTNNFLRHVESMKLLPSGAGHISHLNAVILGESLATEEDDFVLPSEDFASQANVQSPEQYLKMYNRSIEDPAGFWSEIASEFYWKQRWGDKVCDENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPGLDGTLTYTELLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALSQRIIDCKPKVVITCNAVKRGPKPIYLKDIVDAAINDSAQNGVSIDKCLVYENPLAMKRVDTKWKEGRDIWWQDVIPQYPTTCPLEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGASVIVYEGAPNYPDAGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDAFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVILDEKGVEIEGECNGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLIGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTVVDGVPYSEELRKDLVLIVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELADS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01046 752 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 114 748 IPR011904 GO:0003987|GO:0016208|GO:0019427
Gma19g01046 752 Gene3D - 100 622 IPR042099 -
Gma19g01046 752 Hamap Acetyl-coenzyme A synthetase [acs]. 96 750 IPR011904 GO:0003987|GO:0016208|GO:0019427
Gma19g01046 752 PANTHER ACETYL-COENZYME A SYNTHETASE 72 752 - -
Gma19g01046 752 CDD ACS 117 739 - -
Gma19g01046 752 Pfam AMP-binding enzyme 188 627 IPR000873 -
Gma19g01046 752 ProSitePatterns Putative AMP-binding domain signature. 366 377 IPR020845 -
Gma19g01046 752 Pfam AMP-binding enzyme C-terminal domain 636 714 IPR025110 -
Gma19g01046 752 Gene3D - 623 752 IPR045851 -
Gma19g01046 752 SUPERFAMILY Acetyl-CoA synthetase-like 106 747 - -
Gma19g01046 752 Pfam Acetyl-coenzyme A synthetase N-terminus 119 179 IPR032387 -
Gma19g01046 752 PANTHER ACETYL-COENZYME A SYNTHETASE 72 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01046 Gma-Chr19 38257566 38265588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01046 61 751 Acyl Lipid Metabolism Gene Families AT5G36880 83.936 0.0 1245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01046 K01895 - gmx:100808939 1565.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01046 19 38257566 38265588 Gma16g00403 16 4283371 4292189 GST