Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00403 ATGCTTTGTAACTTGCAAGAAATAACCAGGAAACTAAACAACCGGCAAGCCAGCAAGTCTTTTGTGGGAATTGAGTTCATTCAAATGATTCCTCTGTCCCATAACTCAGTCTCTGTTCACCTGGGTGGAGTACCCTGTGACCCTCTTCACCCAATTGCGTTCGATCCCACTCTGAACAAGCCTTGTTCTTCCACCTCTCTGTTTTGGAACTGCAAGAGGAGAAGGAAGAGGAAAAACTCCATTATCATGGCCTCTAATCTCAGGACCAACAATTTCCTGCGCCATGTGGAATCAATGAAGCTTCTTCCATCAGGTGCTGGCCACATTTCGCACCTGAACGCTGTGATACTTGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTGAGGACTTTGCTGGCCAAGCCAATGTTCAGTCCCCAGAACAGTATCTGAAGATGTATAAGAGATCGATTGAGGACCCTGCTGGATTCTGGTCTGAGATTGCCTCAGAGTTCTATTGGAAACAGAGATGGGGTGACAAAGTGTGTGATGAAAATTTTGATGTAAGGAAAGGGAATATAAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAGGTCGCCGTTTACTGGGAAGGCAATGAGCCTGGTTTGGATGGTACTTTGACATACACTCAGCTTCTCCAGCAAGTTTGCCAGCTTGCAAACTACCTTAAAGATATTGGCGTGAAGAAGGGAGATGCTGTAATTATTTATTTGCCCATGCTTATGGAGCTTCCCATCGCAATGCTTGCCTGTGCCCGGATTGGTGCTGTTCATTCGGTTGTATTTGCTGGTTTTTCTGCAGAAGCTCTTTCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCTCTAAGCCTATCTATCTGAAAGATATTGTTGATGCTGCAATCAATGATTCATCCCAAAATGGGGTTTCTATAGATAAATGCCTAGTTTATGAAAACCCATTAGCAATGAAGAGGGTAGATACCAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTCATTCATCAATATCCAACTACTTGTCCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCAAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTCAAGTATGCATTTGACTACAAGCCGCATGACATCTACTGGTGTACTGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCATCTGTCATCGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGAGATGTTGGGACATTGTTGACAAATATAAGGTGACAATATTCTACACTGCTCCTACATTGGTGCGGTCCCTCATGCGTGATGGTGACACGTTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTAGGAAGTGTAGGCGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACGGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAACCTGGTTCTGCAACTCTCCCTTTCTTTGGAGTTCAGCCAGTCATTGTGGATGAGAAAGGTGTTGAAATAGAAGGAGAGTGCAATGGATATTTGTGTGTGAAGAAATCATGGCCCGGGGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTTCCGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCACTGGAAGAGTTGATGATGTTATCAATGTTAGTGGGCATCGAATTGGCACAGCAGAAGTGGAATCAGCTTTAGTTTCACATCCGCAATGTGCAGAGGCTGCTGTGGTTGGTGTGGAGCATGAGGTCAAAGGACAGGGCATCTATGCATTTGTTACAGTTGTGGATGGTGTTCCTTACAGTGAAGAACTGCGGAAGGACCTTGTACTCACAGTTCGAAAGCAGATAGGAGCCTTTGCAGCGCCTGACAAAATTCATTGGGCACCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGCGAAGAATTCTGAGAAAAATTGCTTCCCGGCAGCTGGATGAACTTGGAGATACAAGTACCCTTTCAGATCCAAATGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGA 2343 0.4452 MLCNLQEITRKLNNRQASKSFVGIEFIQMIPLSHNSVSVHLGGVPCDPLHPIAFDPTLNKPCSSTSLFWNCKRRRKRKNSIIMASNLRTNNFLRHVESMKLLPSGAGHISHLNAVILGESLATEEDDFVLPSEDFAGQANVQSPEQYLKMYKRSIEDPAGFWSEIASEFYWKQRWGDKVCDENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAVYWEGNEPGLDGTLTYTQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALSQRIIDCKPKVVITCNAVKRGSKPIYLKDIVDAAINDSSQNGVSIDKCLVYENPLAMKRVDTKWKEGRDIWWQDVIHQYPTTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPHDIYWCTADCGWITGHSYVTYGPMLNGASVIVYEGAPNYPDAGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDTFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATLPFFGVQPVIVDEKGVEIEGECNGYLCVKKSWPGAFRTLYGDHERYETTYFKPFSGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTVVDGVPYSEELRKDLVLTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLSDPNVVNQLIELADS 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00403 780 PANTHER ACETYL-COENZYME A SYNTHETASE 100 780 - -
Gma16g00403 780 Pfam AMP-binding enzyme 216 655 IPR000873 -
Gma16g00403 780 Gene3D - 651 780 IPR045851 -
Gma16g00403 780 Gene3D - 129 650 IPR042099 -
Gma16g00403 780 CDD ACS 145 767 - -
Gma16g00403 780 Pfam Acetyl-coenzyme A synthetase N-terminus 147 207 IPR032387 -
Gma16g00403 780 ProSitePatterns Putative AMP-binding domain signature. 394 405 IPR020845 -
Gma16g00403 780 SUPERFAMILY Acetyl-CoA synthetase-like 134 775 - -
Gma16g00403 780 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 142 776 IPR011904 GO:0003987|GO:0016208|GO:0019427
Gma16g00403 780 Hamap Acetyl-coenzyme A synthetase [acs]. 124 778 IPR011904 GO:0003987|GO:0016208|GO:0019427
Gma16g00403 780 Pfam AMP-binding enzyme C-terminal domain 664 742 IPR025110 -
Gma16g00403 780 PANTHER ACETYL-COENZYME A SYNTHETASE 100 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00403 Gma-Chr16 4283371 4292189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00403 89 779 Acyl Lipid Metabolism Gene Families AT5G36880 83.936 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00403 K01895 - gmx:100789257 1568.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01046 19 38257566 38265588 Gma16g00403 16 4283371 4292189 GST