Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00070 ATGTCGACCTCTTCCATTAACGGGTGGTGCCTCTCTTCCATCTCCCCAGCCAAAACCTCTCTCAAGAAGGCCACATTAGGCCCTTCTGTCTTCGCAACCGTTAGCActccttcttctccttcttcttcttcttcttcttccttcccttctCTCATTCAAGACAGGCCTGTCTTTGCTGCCCCTGCCCCCATCATCACCCCAACTGTGAGAGAGGATATGGCAAAGGAATACGAGCAAGCTATTGAAGAACTCCAGAAATTGTTGAGGGAGAAGAGTGAACTCAAAGCCACAGCTGCTGAGAAAGTGGAGCAGATAACAGCTTCTCTGGGAACATCATCATCTGATGGCATCCCATCATCAGAAGCCTCAGACAGGATCAAAGCTGGTTTCATTCACTTCAAGAAGGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAGAGCCCCAAGTTTATGGTGTTTGCTTGCTCAGACTCAAGGGTGTGCCCATCTCATGTGCTAGATTTCCAACCAGGAGAGGCCTTTGTGGTCAGAAATGTTGCTAACATTGTCCCACCATATGACCAGTCAAAATACGCTGGAACTGGGGCAGCAGTTGAGTATGCTGTTTTGCATCTTAAGGTGTCTGAGATTGTGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTCTGTCTTTCCCATATGATGGAACCTACTCTACTGATTTTATTGAGGAGTGGGTCAAAATTGGCTTGCCTGCAAAGGCAAAGGTGAAGACACAACATGGGGATGCACCTTTTGCTGAGTTGTGCTCACACTGTGAGAAGGAAGCTGTGAATGTTTCCCTTGGAAACCTTCTAACATACCCATTTGTTAGAGATGGCTTGGTGAACAAGACATTGTCACTAAAAGGAGGATACTATGACTTTGTTAAGGGATCTTTTGAGCTCTGGGGCCTTCAGTTTGGCCTTGCATCCTCTTTCTCCGTATGA 993 0.4481 MSTSSINGWCLSSISPAKTSLKKATLGPSVFATVSTPSSPSSSSSSSFPSLIQDRPVFAAPAPIITPTVREDMAKEYEQAIEELQKLLREKSELKATAAEKVEQITASLGTSSSDGIPSSEASDRIKAGFIHFKKEKYDKNPALYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQSKYAGTGAAVEYAVLHLKVSEIVVIGHSACGGIKGLLSFPYDGTYSTDFIEEWVKIGLPAKAKVKTQHGDAPFAELCSHCEKEAVNVSLGNLLTYPFVRDGLVNKTLSLKGGYYDFVKGSFELWGLQFGLASSFSV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00070 330 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 330 - -
Gma19g00070 330 Gene3D Carbonic anhydrase 110 330 IPR036874 GO:0004089|GO:0008270
Gma19g00070 330 PANTHER CARBONIC ANHYDRASE 1 330 IPR001765 GO:0004089|GO:0008270
Gma19g00070 330 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 161 168 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gma19g00070 330 SUPERFAMILY beta-carbonic anhydrase, cab 123 324 IPR036874 GO:0004089|GO:0008270
Gma19g00070 330 Pfam Carbonic anhydrase 157 314 IPR001765 GO:0004089|GO:0008270
Gma19g00070 330 SMART Pro_CA_2 149 319 IPR001765 GO:0004089|GO:0008270
Gma19g00070 330 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 205 225 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gma19g00070 330 Coils Coil 70 104 - -
Gma19g00070 330 CDD beta_CA_cladeB 129 318 IPR045066 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00070 Gma-Chr19 764462 769513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00070 K01673 - gmx:100781868 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00070 19 764462 769513 Gma19g00070 19 764462 769513 ECH
Gma02g00312 02 3264504 3275194 Gma19g00070 19 764462 769513 ECH
Gma01g00287 01 3236055 3247297 Gma19g00070 19 764462 769513 ECH
Gma08g02694 08 42201517 42207882 Gma19g00070 19 764462 769513 ECH
Gma18g01250 18 20457504 20466788 Gma19g00070 19 764462 769513 ECH