Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00287 ATGGCTGGAGCATTAAAAAAGTGCATGATGCTGTGTTGCACGAGCAAGATTGTCTCGAAGGAAGAGATGGCAGGAGAATCATACGAGGAAGCCATCACGAGTCTGACCAAGCTTCTCAGTGAGAAAGCTGAGCTCGGTGGCGTTGCCGCCGCAAAGATAAAGGAGCTGACGGCGGAGCTTGATGCCGCCGGTTCGAAGCCGTTTAACCCGGAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGAGAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAGTTTATGGTATTTGCATGCTCAGACTCGAGAGTTTGTCCATCTCATATTCTGGATTTCCAACCGGGTGAAGCCTTTATGGTCCGAAACATTGCTAACATGGTTCCACCATATGACAAGACGAAGTATTCAGGAGCTGGGGCTGCCATTGAATATGCAGTATTGCATTTAAAGGTGGAGAATATTGTAGTTATTGGACACAGTTGCTGTGGAGGTATAAAGGGGCTCATGTCTATCCCAGATGACGGGACCACTGCAAGTGAATTCATAGAGCAATGGGTCCAAATTTGTACTCCAGCAAAGTCCAAGGTTAAAGCAggaccaagtgacttaagtttctcagagcaatgtactaactgtgagaagGAAGCTGTGAACGTATCACTTGGTAACCTATTAACATATCCATTTGTTAGAGATGGAGTTGTTAACAAAACTCTGGCTTTGAAAGGAGCACATTATGATTTCGTTAATGGTACTTTTGAGCTATGGGATTTGAACTTCAAACTTTTTCCCACTGTATCCGTTTAA 837 0.417 MAGALKKCMMLCCTSKIVSKEEMAGESYEEAITSLTKLLSEKAELGGVAAAKIKELTAELDAAGSKPFNPEERIRTGFIHFKNEKFEKNPYLYGELAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFMVRNIANMVPPYDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIEQWVQICTPAKSKVKAGPSDLSFSEQCTNCEKEAVNVSLGNLLTYPFVRDGVVNKTLALKGAHYDFVNGTFELWDLNFKLFPTVSV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00287 278 CDD beta_CA_cladeB 77 266 IPR045066 GO:0004089|GO:0008270
Gma01g00287 278 PANTHER CARBONIC ANHYDRASE 23 278 - -
Gma01g00287 278 SUPERFAMILY beta-carbonic anhydrase, cab 72 276 IPR036874 GO:0004089|GO:0008270
Gma01g00287 278 SMART Pro_CA_2 97 267 IPR001765 GO:0004089|GO:0008270
Gma01g00287 278 Pfam Carbonic anhydrase 105 262 IPR001765 GO:0004089|GO:0008270
Gma01g00287 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 153 173 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gma01g00287 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gma01g00287 278 Gene3D Carbonic anhydrase 63 278 IPR036874 GO:0004089|GO:0008270
Gma01g00287 278 PANTHER CARBONIC ANHYDRASE 23 278 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00287 Gma-Chr1 3236055 3247297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00287 K01673 - gmx:100810496 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00287 01 3236055 3247297 Gma01g00287 01 3236055 3247297 ECH
Gma01g00287 01 3236055 3247297 Gma19g00070 19 764462 769513 ECH
Gma01g00287 01 3236055 3247297 Gma02g00312 02 3264504 3275194 GST
Gma01g00287 01 3236055 3247297 Gma18g01250 18 20457504 20466788 PCT
Gma18g01250 18 20457504 20466788 Gma01g00287 01 3236055 3247297 PCT