Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02543 atgaatggggctagtagcagtaaaagaaaaagaaaaaggggaggtcggcccaaaagtaattactggaatgaagttgaaaaaataggtgacatgtggaagtgcaaccattgtgaaggggagttccatggaggtgctacaagaattaaagagcatatcattggtggaggaaaaaatattagaaaatgcccccactatcctgcttccggttcaattacacggaatcaattacaagaagatgtggagcatgattctgctgcatttaaaagcaatgacatggaaaaggcaatttgttatccaaagggggaccctgatgctatttacatcaggaagagcgatattgagcttttacagcctgagaaatgccttaatgataatatcattgacttttatataaagtatttgataaataataaactcccaagtgataaacagaagaggtttcactttttcaattgctttttctttcctaagcttgttgatttaagcacagataatcgttcaattgcttgtgatggtaaagcagcatttcagcgtgtaagcaattggacaagaaaagtgaacctttttgaaaaggattatatcttcattcccataaactatagtcttcattggagtttgattgtcatttgtcaccctgctgaagtcatgacatgctacagagatgaagaaactaagggatctcccaaagaagcttgcatcttgcacatggattcccgaaaaggaattcatcaagatctccacaatgttttccaaagttatctatgtgaagaatggaaagagaggcacaacaatgtgagggatgatgcttcttctaaatttttagatcttccattcgtgccacttgagctgcctcagcaacaaaatgcatacgattgtggcatctttttgctccactatgtggaacgttttctggaaaaagctccaatcaactttaaccgttccctgataaccaacttcagttcttggttccctccactagatgcttctctgaaacgatctcatatacagaaactattaatagttgaaggaggcaacaaaatgattgatggtgattcagttaactctcaaaacaatacaaaattgtcagcttcagcaggaggtgatgtagaagatcatgctgtgaacggagGTAGAGATGATACTATCAGGAAGAGGCTAAAGGTTGAGCTAAGCCGATCTGAAGACTCAAAACAGAGACATGAAGGCTTATCAAACTTGGATGACAAGAAACAGTATACATCCAAGATGCTGTTAGCTGCAATTGATGAGTGCCATAGAGGAACTTATGATTTTGTCTATCTGCCAATTGATTTCAGGAACAATGGCAATGTGGGATATGCATTCATCAACATGATCAATCCTGGCTTGATTATACTATTCTATCAGGTGTTCAATGGGAAGAAATGGGAGAAATTCAACAGTGAGAAAGTGGCATCACTAGCATATGCTCGCATACAAGGGAAAGCAGCTCTCATTGCTCACTTCCAAAATTCAAGCTTGATGAATGAGGATAAGCACTGCAAGCCTATATCCTCTTCAACGCCGATGGCCCTAATGCCAGTGATCAGGTTCCTTTCCCAGTTGGCATTAACATTCGCAACAAAGTTGGAAGAGTGA 1617 0.1255 MNGASSSKRKRKRGGRPKSNYWNEVEKIGDMWKCNHCEGEFHGGATRIKEHIIGGGKNIRKCPHYPASGSITRNQLQEDVEHDSAAFKSNDMEKAICYPKGDPDAIYIRKSDIELLQPEKCLNDNIIDFYIKYLINNKLPSDKQKRFHFFNCFFFPKLVDLSTDNRSIACDGKAAFQRVSNWTRKVNLFEKDYIFIPINYSLHWSLIVICHPAEVMTCYRDEETKGSPKEACILHMDSRKGIHQDLHNVFQSYLCEEWKERHNNVRDDASSKFLDLPFVPLELPQQQNAYDCGIFLLHYVERFLEKAPINFNRSLITNFSSWFPPLDASLKRSHIQKLLIVEGGNKMIDGDSVNSQNNTKLSASAGGDVEDHAVNGGRDDTIRKRLKVELSRSEDSKQRHEGLSNLDDKKQYTSKMLLAAIDECHRGTYDFVYLPIDFRNNGNVGYAFINMINPGLIILFYQVFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLMNEDKHCKPISSSTPMALMPVIRFLSQLALTFATKLEE 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02543 538 Gene3D - 98 340 - -
Gma18g02543 538 Pfam RNA recognition motif 2 410 496 IPR007201 -
Gma18g02543 538 SUPERFAMILY Cysteine proteinases 93 340 IPR038765 -
Gma18g02543 538 MobiDBLite consensus disorder prediction 1 20 - -
Gma18g02543 538 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 88 416 - -
Gma18g02543 538 Pfam Ulp1 protease family, C-terminal catalytic domain 121 317 IPR003653 GO:0006508|GO:0008234
Gma18g02543 538 SUPERFAMILY RNA-binding domain, RBD 411 487 IPR035979 GO:0003676
Gma18g02543 538 MobiDBLite consensus disorder prediction 1 16 - -
Gma18g02543 538 Gene3D - 147 280 - -
Gma18g02543 538 MobiDBLite consensus disorder prediction 351 376 - -
Gma18g02543 538 ProSiteProfiles Ubiquitin-like protease family profile. 106 303 IPR003653 GO:0006508|GO:0008234
Gma18g02543 538 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2A-RELATED 88 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02543 Gma-Chr18 59518681 59529424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02543 K08596 - gmx:102663522 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02543 18 59518681 59529424 Gma08g02395 08 23679944 23685668 GST