Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02395 ATGCCTTCTGAGACAATTGACTTCAAGAGTTTTTCTTCATCGTTGTATTCTTCTGAAGATATTTGTTCTTCTAAGGAGAGACAGGCTAGCTTATGGAAATCAGATAACATGCCCAATTGCTATGATTTTGATCAAGGAATAAAAACTAGCTTGAATGTACAATCATTATCCCATTTATCAGATAGTAGCAAAGTCAATGTAGTTGCTACTCAGCATGAAAGTAGTCTCTTTTCAAGTTCTTTGTCGGAGTTGTTTAGCAGGAAATTGAGATTATCTGCAAATAATGCTTTATATGGACATTCAGTTGACACTGTTGCATCCCACTATGAGGAAGAGAGACTTTTTGACTCTCTTGAAGAACTCGAGGCTCAAATTATTGGAAATCTACTCCCCAGTGATGATGATTTGCTTTCTGGAGTCACTAATGGGCTCGACCACATCATCCAAGACAGCTCTGGTGATGACACGGATGAACTAGACCTTTTCAGTAGTGTTGGAGGGATGGATTTAGGACATGATAATTGTTCATCTTCTGAACAAAAGAATTCTGAAATCCTTGATGAAGCTTGTAACAGTCAACTAGGGCTGCGTAGTGCCTCGATTGCTGGAGAGCAGCCTTACAGTGAACACCCTTCTAGAACAATAGTCGTGAGAAACATTAATAGTCAACACAAAGAAAGTAATGTTTATCTGCATCAAAACAGCCTTCCTCTAAAGTCACCAACTAGCTTCCCGGGTTTGCATGGGATTTCTAAATCTGGTAAGCTGGATGGTGGAAGAGTTCTTGGTGTTGAGCCTGCCATATGCACACCATCCCCGGAAACTGCTTTTTTTCATGGGGTCTCTTCAAGTGTTCCTAACTCCTTACCATCACTAGTCAGAGTTAAATCAGCTGACAACAGATGTGAAGTTACTGAATCTGGTTCACCTGGCCAGTTGAATTTTGATAGTCAAGCTGCTCCAGCTTTTCATCCCCATTCCCTTCCAGAATTTCATGATGGTTTAGCTAACACTGTTCATCATATTCCTCCCGAGGTGGCAGCAAACATCAATCTCAAAACACAGGAAAGAATAGATAACATGCAGTTCTGTCAAGTAAACTCCAATGGGCGCTTCATGGAATTCAATGAATGTGTTTTTAAATCCTCTGGTAATGGAAGCTGTCCTCTTCCTGGTCATCATTACAAATGGGGAAACTCCTATCAGCCTCCTGGAATGATGTGGCCAAATTCACCTTCGTATATTGATGGAGTTTGTGCAGCCACTAATCTGCCAAGATTGCATGGACTTCCTAGGTCACCATCACATATGATGGCCACTGTTTTACCCATAAATGGCCAGCATGTGCCTTCAGCTCCTTTTTGGGACAGAAGACATACCTATGCAGGGGAATCTCTTGGGAATATGCAATTTTCCGGTAACACAGCAGCACACTGTGTTGATTTTGTTTCTTATAATATCTTTCCACATTTTGGAGGAAATTGTGTTGACCTTAGAGTCCTACCCAAGAATCTTGGAGTCCATTTTCATAACCAAGGGGACCTAATGTTTCCCAGAAGAAACCACATGATTAATTCATTTGAGACTCACAAACAACGTACCAGAAGCCGCAGAAATGAAGGTTTGCCAAACTTGGATGACAAGAAACAGTATGAACTTGATATTGACCGCATAAAGAAGGGAGAAGATAACCGAACAACACTAATGATAAAGAACATTCCTAACAAGTATACATCCAAGATGCTGTTAGCTGCAATTGATGAACGCCATAGAGGAACTTATGATTTTGTTTATCTGCCAATTGATTTCAGAAACAAATGCAATGTGGGATATGCATTCATCAACATGATCAATCCTGGCTTGATTATACCATTCTATCAGGTGTTCGATGGGAAGAAATGGGAGAAATTCAACAGTGAGAAAGTGGCATCACTAGCATATGCTCGTATACAAGGGAAAGCAGCTCTCATTGCTCACTTCCAAAATTCAAGCTTGATGAATGAGGATAAGCGCTGCAGGCCTATCCTCTTCAACACCGATGGCCCTAATGCCGGTGACCAGGTTCCTTTCCCAGTTGGCATTAACATTCGCAACAAAGCTGGAAGAGTGAGAAACAACACTCAGGAGGATAACCTGCAAGGGAGTCGGAGTCTGCCTAATTTGGGAATCAGTAAGCTCTCATCTGATGGAGACAGTCATTCATTGGAGTCAGACTAA 2217 0.4136 MPSETIDFKSFSSSLYSSEDICSSKERQASLWKSDNMPNCYDFDQGIKTSLNVQSLSHLSDSSKVNVVATQHESSLFSSSLSELFSRKLRLSANNALYGHSVDTVASHYEEERLFDSLEELEAQIIGNLLPSDDDLLSGVTNGLDHIIQDSSGDDTDELDLFSSVGGMDLGHDNCSSSEQKNSEILDEACNSQLGLRSASIAGEQPYSEHPSRTIVVRNINSQHKESNVYLHQNSLPLKSPTSFPGLHGISKSGKLDGGRVLGVEPAICTPSPETAFFHGVSSSVPNSLPSLVRVKSADNRCEVTESGSPGQLNFDSQAAPAFHPHSLPEFHDGLANTVHHIPPEVAANINLKTQERIDNMQFCQVNSNGRFMEFNECVFKSSGNGSCPLPGHHYKWGNSYQPPGMMWPNSPSYIDGVCAATNLPRLHGLPRSPSHMMATVLPINGQHVPSAPFWDRRHTYAGESLGNMQFSGNTAAHCVDFVSYNIFPHFGGNCVDLRVLPKNLGVHFHNQGDLMFPRRNHMINSFETHKQRTRSRRNEGLPNLDDKKQYELDIDRIKKGEDNRTTLMIKNIPNKYTSKMLLAAIDERHRGTYDFVYLPIDFRNKCNVGYAFINMINPGLIIPFYQVFDGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLMNEDKRCRPILFNTDGPNAGDQVPFPVGINIRNKAGRVRNNTQEDNLQGSRSLPNLGISKLSSDGDSHSLESD 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02395 738 MobiDBLite consensus disorder prediction 705 738 - -
Gma08g02395 738 Pfam RNA recognition motif 2 565 661 IPR007201 -
Gma08g02395 738 SUPERFAMILY RNA-binding domain, RBD 567 652 IPR035979 GO:0003676
Gma08g02395 738 MobiDBLite consensus disorder prediction 705 730 - -
Gma08g02395 738 PANTHER PROTEIN MEI2-LIKE 4 44 229 - -
Gma08g02395 738 PANTHER RNA RECOGNITION MOTIF-CONTAINING 225 724 - -
Gma08g02395 738 PANTHER RNA RECOGNITION MOTIF-CONTAINING 44 229 - -
Gma08g02395 738 CDD RRM3_MEI2_like 568 653 IPR034454 -
Gma08g02395 738 PANTHER PROTEIN MEI2-LIKE 4 225 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02395 Gma-Chr8 23679944 23685668 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02395 - - gmx:100797697 1483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02395 08 23679944 23685668 Gma08g02395 08 23679944 23685668 ECH
Gma18g02543 18 59518681 59529424 Gma08g02395 08 23679944 23685668 GST