Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02538 ATGGCAGCCTACTCAAGCCATGCTTTGAAAACCATCCCTTTTTCTTCCTTTGTGAAGCCTGTCAGTACCAAACCAACATCAttcttcacaccttcacctaccaaacctttcttacccttcacctcaccaaaccACTCTCTCACCAAAAATCTCAAGCTGAACTCCACTTTGCCACACTTTTGCTTGTCTTCAGTTCCCAAGAAATCTTTCACTTGTAGAAGCCAGGCTGAGCCTGTTGACTCAGAAAAAGTCCAAGAACTGAGTGTGTATGAGATCAACGAGCGTGACCGTGGAAGCCCCGTTTATCTTCGATTGAGCTATAAAAGTGTCAATTCCCTTGGTGATTTAGTCCCCTTTAGCAACAAGTTGTACACTGGAGATTTGCAAAAGCGCATTGGGATAACATCTGGTATCTGTATTTTGATCCAAAACAAAGCTGAAAAGAAAGGGGACAGGTATGAAGCAATCTTCAGCTTCTACTTTGGAGACTATGGTCACATAGCAGTGCAGGGACCTTACCTGACCTATGAGGACACATATTTGGCTGTGACTGGTGGGTCTGGCATATTTGAGGGTGTTAAAGGTCAAGTGAAGCTGCGTCAGATTGTGTATCCTTTCAAGATTTTGTACACATTTTATCTAAAGGGTATCAAGGATTTGCCTCAGGAGCTTCTTGTCAAGACTGTTGAGCCAATTCCATCTGTTGAACCTTCCCCTGCTGCTAAGGCCCTTGAGCCCAATGCTACCATTGCTGGCTTCACCGACTAA 768 0.4128 MAAYSSHALKTIPFSSFVKPVSTKPTSFFTPSPTKPFLPFTSPNHSLTKNLKLNSTLPHFCLSSVPKKSFTCRSQAEPVDSEKVQELSVYEINERDRGSPVYLRLSYKSVNSLGDLVPFSNKLYTGDLQKRIGITSGICILIQNKAEKKGDRYEAIFSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVKGQVKLRQIVYPFKILYTFYLKGIKDLPQELLVKTVEPIPSVEPSPAAKALEPNATIAGFTD 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02538 255 Pfam Allene oxide cyclase 82 253 IPR009410 GO:0016853
Gma18g02538 255 PANTHER ALLENE OXIDE CYCLASE 3 255 - -
Gma18g02538 255 SUPERFAMILY Allene oxide cyclase-like 83 255 IPR034871 GO:0009695|GO:0046423
Gma18g02538 255 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 3 255 IPR009410 GO:0016853
Gma18g02538 255 Gene3D - 69 255 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02538 Gma-Chr18 59476055 59477782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02538 83 255 Acyl Lipid Metabolism Gene Families AT1G13280 68.000 5.26e-82 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02538 K10525 - gmx:100805194 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02538 18 59476055 59477782 Gma08g02387 08 23602650 23604097 GST