Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02387 ATGGCAACCTACTCGAGCCATGCTTTGAAAACCATCCCTTCTTCCTTCGTGAAACCAGTTACTGTTAGTGCCAAAACAACATCATTATACCTCACACCCTCAAATACCAAACCTTTCTTACCCTTCACCTCATCAAACCACTCTCTCACCGAAAACCTTAAGCTGAACTCCACTTTGCCACACTTTTGCTTGTCTTCAGTCCCCAAGAAATCTTTCACTTGTAGAAGCCAGGCTGAGCCTGTTGACTCTGAAAAAGTCCAAGAATTGACTGTGTATGAGATCAACGAGCGTGACCGTGGAAGCCCTGTTTATCTTCGATTGAGCTATAAAAGTGTCAATTCCCTAGGTGATTTAGTCCCCTTTAGCAACAAGTTGTACACTGGGGATTTGCAAAAGCGCATTGGGATAACATCTGGTATCTGTATTTTGATCCAAAACAAAGCTGAGAAGAAAGGGGATAGGTATGAAGCAATCTTCAGCTTCTACTTTGGAGACTATGGTCACATAGCAGTGCAGGGACCTTACCTGACCTATGAGGACTCATATTTGGCTGTGACTGGTGGGTCTGGCATATTTGAGGGTGTTAAAGGTCAAGTGAAGCTGCATCAGATTGTGTATCCTTTTAAGATTTTGTACACATTTTATCTAAAGGGCATCAAGGATTTGCCTCAGGAGCTTCTTGTCAAGACTGTTGAGCCAATTCCATCTGTTGAACCTTCCCCTGCTGCTAAGGCCCTTGAGCCAAATGCTACCATTGCTGGCTTCACCGACTAA 774 0.4393 MATYSSHALKTIPSSFVKPVTVSAKTTSLYLTPSNTKPFLPFTSSNHSLTENLKLNSTLPHFCLSSVPKKSFTCRSQAEPVDSEKVQELTVYEINERDRGSPVYLRLSYKSVNSLGDLVPFSNKLYTGDLQKRIGITSGICILIQNKAEKKGDRYEAIFSFYFGDYGHIAVQGPYLTYEDSYLAVTGGSGIFEGVKGQVKLHQIVYPFKILYTFYLKGIKDLPQELLVKTVEPIPSVEPSPAAKALEPNATIAGFTD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02387 257 Pfam Allene oxide cyclase 84 255 IPR009410 GO:0016853
Gma08g02387 257 PANTHER ALLENE OXIDE CYCLASE 3 257 - -
Gma08g02387 257 Gene3D - 71 257 IPR044859 -
Gma08g02387 257 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 3 257 IPR009410 GO:0016853
Gma08g02387 257 SUPERFAMILY Allene oxide cyclase-like 85 257 IPR034871 GO:0009695|GO:0046423
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02387 Gma-Chr8 23602650 23604097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02387 34 257 Acyl Lipid Metabolism Gene Families AT1G13280 55.556 3.27e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02387 K10525 - gmx:100803536 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02387 08 23602650 23604097 Gma08g02387 08 23602650 23604097 ECH
Gma18g02538 18 59476055 59477782 Gma08g02387 08 23602650 23604097 GST