Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02305 ATGGCAACCACGAACCCTTTTGATTTGTTGGGTGACGACGCTGAGGACCCTTCTCAGCTCATCGCCGCCGAGCAACTCAAGGCGGCGGCTGCGGCCTCGGCGGCCACCGCGGCTCCCAAGAAGGCGCCGGCTCAGCAGAACAAGCCGGCTCAGCTCCCTACCAAGCCGCCTCCTCCGGCTCAGGCTGTGAGGGATGCCAGAAACGAGCCAGTTCGTGGAGGCCGTGGAGGTGGACGAGGTGGGGGACGTGGATTTGGACGTGGTCGTGGGTTTAGTCGTGACTCCTCGAATGATGAGAACTCATTCCCTACCAGCAGAGCTCCTTATAATCAGGGTCCTTTTGAAGAAGGAGATGCTGGGAAGTCTTCTGAAAGACGCAGTTATGGTGGACCACGAGTTCCTTACCGTGGTGGTCGTCGTGGAGGTTTCAGCAATGGTGAAACTGGTGAAGGTGAAGACGGACGACCTCGAAGAGCATTTGATCGTCGCAGTGGGACTGGACGAGGAAATGAATTCAAACGTGAAGGTTCAGGACGAGGTAACTGGGGAACCCAAACTGATGAACTTGCTCAGGTAACTGATGAGGTTGTGAATGAAACGGAAAAGAATTTGGGTGATGAGAAGCCTGCAGTTGAAGAAGATGTAGCTGATGGAAACAAGGACAGCCCTACTAATGAAACCGAAGAAAAAGAGCCTGAAGATAAGGAAATGACTCTGGAGGAATATGAAAAAGTGTTGGAAGAGAGAAGGAAGGCCTTCCAAGCACTCAAGACTGAAGAGAGAAAGGTGGACACTAAAGAGTTTGAATCCATGCAGGCCTTATCAAGCAAGAAAGATAATCATGACATATTCATTAAACTGGGATCTGATAAAGATAAGCGAAAAGAGGCTTTTGAGAAGGAAGAAAAATCCAAGAAGTCCGTGAGCATCACTGAGTTTCTGAAGCCCGCTGAGGGGGAAGCATACTATAACCCAGGGCGTGGTAGGGGTCGTGGCCGTGGTTCACGAGGCGGAGGCGGAGGTGTTTACCGTGGAAGTTCCACCAACAATGCACCTGCTCCATCCATTGAAGATCCTGGGCATTTCCCAAACTTGGGTGCCAAGTGA 1107 0.5167 MATTNPFDLLGDDAEDPSQLIAAEQLKAAAAASAATAAPKKAPAQQNKPAQLPTKPPPPAQAVRDARNEPVRGGRGGGRGGGRGFGRGRGFSRDSSNDENSFPTSRAPYNQGPFEEGDAGKSSERRSYGGPRVPYRGGRRGGFSNGETGEGEDGRPRRAFDRRSGTGRGNEFKREGSGRGNWGTQTDELAQVTDEVVNETEKNLGDEKPAVEEDVADGNKDSPTNETEEKEPEDKEMTLEEYEKVLEERRKAFQALKTEERKVDTKEFESMQALSSKKDNHDIFIKLGSDKDKRKEAFEKEEKSKKSVSITEFLKPAEGEAYYNPGRGRGRGRGSRGGGGGVYRGSSTNNAPAPSIEDPGHFPNLGAK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02305 368 Coils Coil 239 262 - -
Gma18g02305 368 MobiDBLite consensus disorder prediction 150 175 - -
Gma18g02305 368 MobiDBLite consensus disorder prediction 199 238 - -
Gma18g02305 368 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 368 - -
Gma18g02305 368 Pfam Stm1 1 77 IPR019084 -
Gma18g02305 368 MobiDBLite consensus disorder prediction 179 198 - -
Gma18g02305 368 SMART HABP4_PAI_RBP1_2 156 264 IPR006861 -
Gma18g02305 368 MobiDBLite consensus disorder prediction 28 238 - -
Gma18g02305 368 Gene3D - 154 267 - -
Gma18g02305 368 Pfam Hyaluronan / mRNA binding family 156 263 IPR006861 -
Gma18g02305 368 MobiDBLite consensus disorder prediction 291 309 - -
Gma18g02305 368 MobiDBLite consensus disorder prediction 291 368 - -
Gma18g02305 368 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 368 IPR039764 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02305 Gma-Chr18 56823817 56828126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02305 K13199 - gmx:100814825 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02305 18 56823817 56828126 Gma18g02305 18 56823817 56828126 ECH
Gma18g02305 18 56823817 56828126 Gma09g02228 09 47858678 47863067 GST
Gma03g01037 03 34758033 34762510 Gma18g02305 18 56823817 56828126 PCT
Gma07g01043 07 12499142 12503486 Gma18g02305 18 56823817 56828126 PCT