Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01043 ATGGCGACTGCGAATCCCTTTGATTTGTTGGGTGACGACGCCGAGGACCCCTCGCAGTTGATCGCGGCGGAGCAGCTCAAGGCCGCGGCGGCCGCGGCCACGGCGCCGCCCAAGAAAGACCAGGCCAAGCCCGGAGCTCGTGGCGGCGCGCCGGCCCAGTTGCCGTCGAAGCCCCTCCCTCCCTCTCAGGCTGTGAGGGAGGCTAAAAATGAAACTTCTTACGGCAGCCGTGGAGGTGGCCGAGGAGGTGGAAGAGGATTTGGACGTGGTCGTGGTGGTGGTGGCGGCTTTGGCCGCGATTTTTCCAATGATGACAACTCATCAGCCCCTGCTAATCAAGGATCTTTTGAAGGGGATTCTGGGAATCACTCAGAAAGACGTGGTTATGGTGGACCTCGTGGGCCCTACCGTGGTGGTGGTGGTGGTCGCGGTCGTCGTGGAGGTTTTACCAACGGTGAAGTTGGTGAAGAAGGACGCCCAAGAAGAGCATTTGAACACCACAGTGGGACTGGACGAGGAAATGAATTCAAACGGGATGGCTCTGGACGTGGGAACTGGGGTACACAGAATGATGACATTGCTGTGGTTACTGAGGAAGTGGTGTATGAAACTGAAAAGAATTTTGCTGATGAGAAGCCTGCAGGCGAGGAAGATGCACCTGAAGGAAACAAGGACTGTCCTGCCAATGAAAATGAAGAAAAGGAGCCTGAGGACAAGGAGATGACACTGGAAGAGTATGAGAAGGTGCTGGAAGAGAAAAGAAAGGCCCTGCAGGCACAAAAAACTGAAGTAAGAAAGGTGGACATCAAGGAGTTTGCATCCATGCAGCCACTGTCTAACAAGAAAGAAAATGATGAGATCTTTATTAAATTGGGATCTGACAAGGATAAACGCAAAGATGCTCTAGAGAAGGAGGAGAAGTCTAAGAAGTCTGTCAACATCACTGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACTCTGGTGGGCGCGGTCGGGGACGTGGCCGTGGTTCTAGAGGAGGTTACAGTGGAAATGCATACAGCAATGTTCCAGCTCCATCAATTGAGGATCCCGGGCAATTCCCAACCTTGAGTGGCAAGTGA 1107 0.5321 MATANPFDLLGDDAEDPSQLIAAEQLKAAAAAATAPPKKDQAKPGARGGAPAQLPSKPLPPSQAVREAKNETSYGSRGGGRGGGRGFGRGRGGGGGFGRDFSNDDNSSAPANQGSFEGDSGNHSERRGYGGPRGPYRGGGGGRGRRGGFTNGEVGEEGRPRRAFEHHSGTGRGNEFKRDGSGRGNWGTQNDDIAVVTEEVVYETEKNFADEKPAGEEDAPEGNKDCPANENEEKEPEDKEMTLEEYEKVLEEKRKALQAQKTEVRKVDIKEFASMQPLSNKKENDEIFIKLGSDKDKRKDALEKEEKSKKSVNITEFLKPAEGERYYSGGRGRGRGRGSRGGYSGNAYSNVPAPSIEDPGQFPTLSGK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01043 368 Pfam Hyaluronan / mRNA binding family 160 266 IPR006861 -
Gma07g01043 368 MobiDBLite consensus disorder prediction 203 242 - -
Gma07g01043 368 Pfam Stm1 1 79 IPR019084 -
Gma07g01043 368 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 368 - -
Gma07g01043 368 MobiDBLite consensus disorder prediction 28 242 - -
Gma07g01043 368 Coils Coil 243 270 - -
Gma07g01043 368 MobiDBLite consensus disorder prediction 101 119 - -
Gma07g01043 368 Gene3D - 158 271 - -
Gma07g01043 368 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 368 IPR039764 GO:0003723
Gma07g01043 368 MobiDBLite consensus disorder prediction 283 313 - -
Gma07g01043 368 MobiDBLite consensus disorder prediction 259 368 - -
Gma07g01043 368 MobiDBLite consensus disorder prediction 150 179 - -
Gma07g01043 368 SMART HABP4_PAI_RBP1_2 160 268 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01043 Gma-Chr7 12499142 12503486 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01043 K13199 - gmx:100805110 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01043 07 12499142 12503486 Gma07g01043 07 12499142 12503486 ECH
Gma03g01037 03 34758033 34762510 Gma07g01043 07 12499142 12503486 GST
Gma07g01043 07 12499142 12503486 Gma18g02305 18 56823817 56828126 PCT
Gma07g01043 07 12499142 12503486 Gma09g02228 09 47858678 47863067 PCT