Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02195 ATGGCTTTGGGGAACAACAGTCACCAGCTTCTGTCAAAAATTGCAACCAATGACAAGCATGGAGAAAATTCTCCTTACTTTGATGGTTGGAAGGCCTATGATTCAAACCCATTTCACCCCACAAAAAATCCTCAGGGTGTCATCCAGATGGGTCTTGCAGAAAATCAGCTCTGCTTTGATCTGATTCAAGAGTGGATAAGGAACAATCCCAAGGCCTCCATTTGCACTGCTGAAGGAGTGAACCAGTTCAAATATATTGCAAACTTTCAAGACTATCATGGATTGCCAGAGTTCAGAAATgctgtggcaaattttatgtcaaaagtgagaggtgggagagtgagatttgatcctgaccgtattttgatgagtgggggggccactggagcaaatgagctaataatgttctgtttggctgatcctggagatgcttttctggttcctagcccttattatccagcATTTGTCCGAGACTTGTGTTGGAGAACAAGGACGCAACTAATTCCCGTAGAGTGTCACAGCTCCAACAATTTTAAGATAACAAGAGAGGCTCTTGAAGAAGCATATGAAAAAGCAAAAGAGGGTAACATCAACGTGAAAGGGTTGATCATAACAAACCCTTCAAACCCTTTGGGAACCACCCTTGACAGGGAAACACTGAAGAGCATAGTGGGGTTCATCAATGAAAAGAACATCCATTTGGTGTGTGATGAAATCTATGCAGCAACAGTGTTCAGAGCCCCTAGCTTTGTGAGTGTCTCTGAGGTGATGCAAGACATTGAGCATTGCAAAAAAGACCTCATTCACATTATTTATAGTTTGTCTAAGGATTTGGGACTTCCAGGGTTCAGAGTTGGAATAGTTTATTCATACAATGATGAAGTGGTGAACAGTGGTAGGAAAATGTCAAGCTTTGGATTGGTCTCATCTCAGACACAGTATTTTCTTGCTGCATTGCTTTCCGACGACGAGTTCGTGGAGAGGTTTCTGGCAGAGAGTGCAAGAAGGTTGGCTGCAAGGCATAGCCACTTCACAAAAGGGCTTGAAAAGGTGAACATTACTTGCCTGCCAAGTAATGCAGGGCTTTTCTTTTGGATGAACTTGAGGGGTTTGCTCAAGGAGAAAACATTTGAGGGTGAAATGATGCTGTGGCGTGTGATCATCAATGAGGTGAAGCTCAATGTGTCACCTGGGTCAGCTTTCAATTGTTCTGAGCCTGGTTGGTATAGGGTGTGCTTTGCAAACATGGATGATGAAACTGTGGATGTTGCACTCATGAGAATCAGGGCTTTTGTTGGCAAGGAGACAGGGAAGCCACCAAAGGAACTCAAACGTTGGAAAAGTAACCTTAGACTCAGCTTCTCCAACTCTAGAAGATTTGATGAGAATGTTATGTCACCTCATTCACCAATGCCTCACTCACCTCTTGTCAGAGCCACTTAG 1443 0.3853 MALGNNSHQLLSKIATNDKHGENSPYFDGWKAYDSNPFHPTKNPQGVIQMGLAENQLCFDLIQEWIRNNPKASICTAEGVNQFKYIANFQDYHGLPEFRNAVANFMSKVRGGRVRFDPDRILMSGGATGANELIMFCLADPGDAFLVPSPYYPAFVRDLCWRTRTQLIPVECHSSNNFKITREALEEAYEKAKEGNINVKGLIITNPSNPLGTTLDRETLKSIVGFINEKNIHLVCDEIYAATVFRAPSFVSVSEVMQDIEHCKKDLIHIIYSLSKDLGLPGFRVGIVYSYNDEVVNSGRKMSSFGLVSSQTQYFLAALLSDDEFVERFLAESARRLAARHSHFTKGLEKVNITCLPSNAGLFFWMNLRGLLKEKTFEGEMMLWRVIINEVKLNVSPGSAFNCSEPGWYRVCFANMDDETVDVALMRIRAFVGKETGKPPKELKRWKSNLRLSFSNSRRFDENVMSPHSPMPHSPLVRAT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02195 480 SUPERFAMILY PLP-dependent transferases 16 433 IPR015424 -
Gma18g02195 480 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 449 - -
Gma18g02195 480 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 7 449 - -
Gma18g02195 480 CDD AAT_like 88 430 - -
Gma18g02195 480 Gene3D - 70 322 IPR015421 GO:0003824
Gma18g02195 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 50 76 - -
Gma18g02195 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 83 99 - -
Gma18g02195 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 120 140 - -
Gma18g02195 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 142 163 - -
Gma18g02195 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 196 220 - -
Gma18g02195 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 232 255 - -
Gma18g02195 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 267 291 - -
Gma18g02195 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 299 322 - -
Gma18g02195 480 Pfam Aminotransferase class I and II 48 428 IPR004839 GO:0009058|GO:0030170
Gma18g02195 480 Gene3D Aspartate Aminotransferase, domain 1 36 427 IPR015422 GO:0003824
Gma18g02195 480 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 273 286 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02195 Gma-Chr18 55727116 55730416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02195 K20772 - gmx:100775969 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02195 18 55727116 55730416 Gma18g02195 18 55727116 55730416 ECH
Gma18g02195 18 55727116 55730416 Gma09g02335 09 48719052 48722547 GST
Gma18g02195 18 55727116 55730416 Gma07g00601 07 6174039 6177257 PCT
Gma18g02195 18 55727116 55730416 Gma16g00290 16 3071897 3075719 PCT
Gma07g00601 07 6174039 6177257 Gma18g02195 18 55727116 55730416 PCT
Gma16g00290 16 3071897 3075719 Gma18g02195 18 55727116 55730416 PCT