Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02175 ATGGATGTAGAAGCGGTGAAAAGGTCTCCTTCTCAAGAAAAATATGGCAGGGTTCAATCTGCAATAAGGTTGTTAGTGCTGGTTGTGTTTCTGGGTTGGATTTTCGTATGGATAGTGACTCCAACAAACACTTACCAACAAAAATGGCAGCCTCGGCTTCAAGCAAAGACTAATTCTATTTTTGGTGCACAAGGTGCAATGCTTCTGGTATACACTTTTCCAATCTTGTTCATAGCTGTTTTGGGATGTGTGTACGTTCACATAGCCAAAAAAGGAAACGGTTTCGGCAAGGAAAGTTATGGCAAGAAACGTGAGGTATCTATATGGAAGCGTTTGGTGCTTGTGAGAGGCCCTCTTGGCATAGTTTCTGGAACAGAAATGGTCTTCTTGTTAATGTTCATTGTTCTCCTAGTTTGGTCCTTTTCAATCTATCTGCATAATGGCTTTGCCAAAATCACCCACAAATCAGCAGCAGAACACGGTCTAAAAGTCTGGGAGAAGAAACTAGATATTGCATCTGTGAGGTTGGCCCTAGTTGGGAACATATGCTTGGCATTCCTGTTTTTCCCGGTTGCTCGTGGTTCCTCAGTGCTACCTCTGCTTGGACTCACACCAGAGAGTTGCATCAAATACCATATTTGGCTAGGAAACGTGGCCATGACCCTTTTCACTGCTCATGGTATTTGTTTCATCATCTATTGGACAGTTACCGATAAACTTTCAAAGATGCTAGAATGGAAAAAAACTGGGATATCAAATGTAGCTGGAGAGGTTGCTTTGCTTGCTGGTTTGTGCATGTGGATTGCAACCATCCCTCGCAATAGGCGAAAAGTTTTTGAGCTCTTCTTCTACACTCACTACCTCTACACCCTCTTCATTGTCTTCTTCATCTTTCACGTGGGCATTTTCTATGCATGCACTATTCTCCCCGGTTTCTACCTCTTCTTGGTTGATCGGTACCTAAGGTTTTTGCAATCAAGACGCCGAGTTCGTTTGGTTTCTGCTCGTGTTTTACCATGTGAAACTGTAGAACTCAACTTCTCCAAGAGCCATGATTTGACTTATAATCCCACAAGTATTATGTTCATAAATGTACCAAGTATATCCAAACTTCAGTGGCATCCATTTACCATTACTTCTAATAGTAATTTGGAGCCAAAAATGATGAGTATTGTCATTAAAGGTGAAGGAACTTGGTCCCAGAAGCTCTACCAGATGCTTTCAACCCCTTCTGCAATTGATCATCTCAATGTCTCAGTTGAAGGTCCCTATGGACCAGCATCAACCAATTATCTAAGGTATGACACTATTGTGATGGTTAGTGGAGGGAGTGGAATCACCCCTTTTATATCCATCATCCGGGAGCTATTGTATTTGAACACAACATTCAGATATAGAACCCCAAAAGTTATCCTAATTTGTGCATTCAAGAACTCTTACTATCTCTCAATGCTAGACCTCATCCTTCCAAATTCTGGCACCCCCTATGATATGTCCAACATGCAACTACAAATTAAGGCTTACATCACAAGAAAGGAGGAGCATAGATTGGAAAACCAAATTCACCTTCAACAAATATGGTTCAAACCCAAGGCAACAGATGCACCCATATCAGCTATTTTAGGTCCAAACAATTGGCTTTGGCTTTGTGCTATAATCTCGTCCTCGTTCATAATTTTCCTCATCTTAATTGGGATCATTACCCGATTCATCATTTTCCCTATAGACCATAATTCTAATAAAATATTTTCACAACCTTTGAGGTCATTCCTCAACATTTTTGCAATATGTGTGTCCATATCAATGGCAGCTAGTGCAGCTGTTCTTTGGAACAAGAAATACAACGACAGAGAAGCAAAACAGATTCAGAACTTAGAAGGATCATCATCAGCAGAATCCCCAAAGTTGAATACTGATGAAGGAGATAAAGAACTGGAAAGCCTCCCACAGCAATCCCTTGTTCAAGCTACAAAGGTGCATTATGGAGCAAGACCTGATCTAAGAAGACTGCTATTGGAACTTGAAGGGTCAAGAGTGGGAGTTTTTGTTTCTGGACCCAAGAAAATGAGGCAAGAGGTTGCTGCCATTTGCTCATCTGATTTAGGAGAAAATCTGCATTTTGAATCCTTTAGCTTTAACTGGTAG 2145 0.4098 MDVEAVKRSPSQEKYGRVQSAIRLLVLVVFLGWIFVWIVTPTNTYQQKWQPRLQAKTNSIFGAQGAMLLVYTFPILFIAVLGCVYVHIAKKGNGFGKESYGKKREVSIWKRLVLVRGPLGIVSGTEMVFLLMFIVLLVWSFSIYLHNGFAKITHKSAAEHGLKVWEKKLDIASVRLALVGNICLAFLFFPVARGSSVLPLLGLTPESCIKYHIWLGNVAMTLFTAHGICFIIYWTVTDKLSKMLEWKKTGISNVAGEVALLAGLCMWIATIPRNRRKVFELFFYTHYLYTLFIVFFIFHVGIFYACTILPGFYLFLVDRYLRFLQSRRRVRLVSARVLPCETVELNFSKSHDLTYNPTSIMFINVPSISKLQWHPFTITSNSNLEPKMMSIVIKGEGTWSQKLYQMLSTPSAIDHLNVSVEGPYGPASTNYLRYDTIVMVSGGSGITPFISIIRELLYLNTTFRYRTPKVILICAFKNSYYLSMLDLILPNSGTPYDMSNMQLQIKAYITRKEEHRLENQIHLQQIWFKPKATDAPISAILGPNNWLWLCAIISSSFIIFLILIGIITRFIIFPIDHNSNKIFSQPLRSFLNIFAICVSISMAASAAVLWNKKYNDREAKQIQNLEGSSSAESPKLNTDEGDKELESLPQQSLVQATKVHYGARPDLRRLLLELEGSRVGVFVSGPKKMRQEVAAICSSDLGENLHFESFSFNW 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02175 714 CDD NOX_Duox_like_FAD_NADP 332 511 - -
Gma18g02175 714 Gene3D - 418 541 IPR039261 -
Gma18g02175 714 Gene3D - 600 713 IPR039261 -
Gma18g02175 714 Pfam FAD-binding domain 329 428 IPR013112 GO:0016491
Gma18g02175 714 PANTHER FERRIC REDUCTION OXIDASE 2 18 713 - -
Gma18g02175 714 PANTHER NADPH OXIDASE 18 713 - -
Gma18g02175 714 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 325 430 IPR017927 GO:0016491
Gma18g02175 714 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 434 710 IPR039261 -
Gma18g02175 714 SFLD Ferric Reductase Domain 41 714 - -
Gma18g02175 714 SFLD Ferric reductase subgroup (FRE) 20 714 - -
Gma18g02175 714 Pfam Ferric reductase NAD binding domain 434 698 IPR013121 GO:0016491
Gma18g02175 714 Pfam Ferric reductase like transmembrane component 177 296 IPR013130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02175 Gma-Chr18 55476164 55481142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02175 9 714 Miscellaneous Gene Families AT1G01580 55.370 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02175 K00521 - gmx:100814642 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02175 18 55476164 55481142 Gma07g00620 07 6359239 6363738 PCT
Gma18g02175 18 55476164 55481142 Gma16g00303 16 3197927 3201896 PCT
Gma07g00620 07 6359239 6363738 Gma18g02175 18 55476164 55481142 PCT
Gma16g00303 16 3197927 3201896 Gma18g02175 18 55476164 55481142 PCT