Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00303 ATGCCTCAAGAAACAGTGGTGAAAAGGTCACCTTTTCAAGAAAATTGTGGGAGGCTTCAATTTGCAATAAGGCTATTAGTGGTGGTATTGCTTCTAGGTTGGATTTTCATTCGGATAATGTCGCCTACAAATACTTTTAGACAAACATGGCTGCCTCGATACAAAGCAAAGACTAATAATACAACTTATATTGGTTCAAAAGGTGCTTATCTTCTCTTGTACACTTTCCCAATCTTGCTCCTAGCTACTTTGGGATGTGTCTACCTTCACATAGGCAAAAAAGTAATCCATTCCAACACGGAGAGCAGCAATGCAAAGAAGCGTGGGGTAACCATATGGAAGCGTCCAGTGCTTATAAAAGGCCCTCTTGGCATTGTTTCTGGCACAGAGATAGCCTTCTTGTTTTTGTTCATTGCCCTCCTAGCTTGGGTCTTTTCAACTTCTGTACAAAACAGCTTTGCAACAATCACCCCACAATTTGCAGCAAAGGATGGCCAGAAAATATGGGAAGAGAAGCTAGATAGAGTAGCAAAAAGGTTAGGTGTGGTTGGGAACATATGTTTGGCATTCATGTTTTTTCCTGTGGCTCGTGGCTCATCTGTGCTGCCACTGCTTGACCTCACCTCGGAGAGTTGCATCAAGTACCATATTTGGCTTGGAAACATAGCCATGACACTTTTTACTTCTCATGGCCTTTGCTACATCATTCTTTGGGCAGTTACTGATCATACTTCTAATATGCTGGAATGGAAAAAGAATGATATATCAATTGTGGCTGGAGAGATAGCTCTGCTTTCTGGTTTGTTCCTATGGATTGCAACCATTCCCCGCATTAGGCGAAAAGTCTTTGAGCTGTTCTATTACACTCATCACCTCTACATCCTCTTCATAGTCTTCTTCATCTTTCATGTTGGCATTACCTATGCCTGCATTATGCTCCCTGGTTTCTACCTCTACTTGGTTGATCGTTACTTAAGGTTTCTGCAATCAAGGTGCCAAGTTCGTCTGGTTTCTGCGCGGGTTTTGCCATGTGAAGCTGTAGAACTCAACTTCTCTAAGGGCTATGGATTAACTTATAACCCCACAAGTGTTATGTTCATAAATATACCAAGCATATCCAAGTTGCAATGGCATCCATTTACTGTTACTTCTAATAGTAATTGGGAGCGAGACAAGCTAAGTGTTGTTATTAAATGTGAAGGAACTTGGACCAAGAAGCTCTATCAGCTGCTTTCAACATCTTCCACAATAGATCGCCTTGCTGTATCTGTTGAAGGTCCTTATGGACCTGCTTCAACCAATTATCTACGCCATGACACTCTTGTGATGGTAAGTGGAGGAAGTGGCATCACACCTTTTATCTCCATCATTAGGGAGCTAATATATCTGAACACTACATTCAAATGCAAGACCCCAAAAGTTGTCCTAATTTGTGCATTCAGAAACTCTACATCTCTGTCAATGCTAGATATGATCCTCCCAATATCTGGCACCCCATCTGAAATTTCTAATATGGAACTACAAATTGAGGCATACATCACAAGAGACAAGGAGCTTAAAGCAGATTGCCCAATTCACACTCAAACCATATGGTTCAAGCCAAATCCATCTGATGCACCAGTACATGCTATATTAGGTCCAAACAGTTGGCTCTGGCTTGGTGCTATAATATCATCCTCTTTCATAATTTTCCTTATCTTGATAGGGATAATTACCCGTTACTACATTTTCCCTATTGATCATAACTCAAATGAAATATTCTCATTCCCGTTGATTGCATTCCTTAACATGCTAGTGATATGTGTGTCCATAGCAAGTGCTGCTAGCGTAGCTTTTCTTTGGAACAAGAAACATAATGCCAAAGAAGCAAAACAGGCTCAGAACTTGGAAGGATCAACACCAACAGTGTCACCAAACTCCATGGTTCACAATGCAGATAGAGAATTGGAAAGCCTTCCATATCAGTCCCTTATTCATGCTACTAATGTGCATTATGGTGTAAGACCAGACCTAAGAAGAATGCTACTTGAACACAAAGGTTCAAGTGTGGGAGTTCTTGCTTCAGGACCCAAAATAATGAGGCAGGAGGTTGCAGCCATTTGCTCATCTGGTTTAGCTGAGAATATACATTTTGAGTCAATTAGCTTTAGATGGTGA 2157 0.4098 MPQETVVKRSPFQENCGRLQFAIRLLVVVLLLGWIFIRIMSPTNTFRQTWLPRYKAKTNNTTYIGSKGAYLLLYTFPILLLATLGCVYLHIGKKVIHSNTESSNAKKRGVTIWKRPVLIKGPLGIVSGTEIAFLFLFIALLAWVFSTSVQNSFATITPQFAAKDGQKIWEEKLDRVAKRLGVVGNICLAFMFFPVARGSSVLPLLDLTSESCIKYHIWLGNIAMTLFTSHGLCYIILWAVTDHTSNMLEWKKNDISIVAGEIALLSGLFLWIATIPRIRRKVFELFYYTHHLYILFIVFFIFHVGITYACIMLPGFYLYLVDRYLRFLQSRCQVRLVSARVLPCEAVELNFSKGYGLTYNPTSVMFINIPSISKLQWHPFTVTSNSNWERDKLSVVIKCEGTWTKKLYQLLSTSSTIDRLAVSVEGPYGPASTNYLRHDTLVMVSGGSGITPFISIIRELIYLNTTFKCKTPKVVLICAFRNSTSLSMLDMILPISGTPSEISNMELQIEAYITRDKELKADCPIHTQTIWFKPNPSDAPVHAILGPNSWLWLGAIISSSFIIFLILIGIITRYYIFPIDHNSNEIFSFPLIAFLNMLVICVSIASAASVAFLWNKKHNAKEAKQAQNLEGSTPTVSPNSMVHNADRELESLPYQSLIHATNVHYGVRPDLRRMLLEHKGSSVGVLASGPKIMRQEVAAICSSGLAENIHFESISFRW 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00303 718 CDD NOX_Duox_like_FAD_NADP 336 515 - -
Gma16g00303 718 Pfam FAD-binding domain 333 432 IPR013112 GO:0016491
Gma16g00303 718 Pfam Ferric reductase NAD binding domain 438 702 IPR013121 GO:0016491
Gma16g00303 718 Pfam Ferric reductase like transmembrane component 180 300 IPR013130 -
Gma16g00303 718 PANTHER FERRIC REDUCTION OXIDASE 2 21 717 - -
Gma16g00303 718 SFLD Ferric Reductase Domain 43 718 - -
Gma16g00303 718 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 329 434 IPR017927 GO:0016491
Gma16g00303 718 PANTHER NADPH OXIDASE 21 717 - -
Gma16g00303 718 Gene3D - 422 541 IPR039261 -
Gma16g00303 718 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 422 493 IPR039261 -
Gma16g00303 718 SFLD Ferric reductase subgroup (FRE) 18 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00303 Gma-Chr16 3197927 3201896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00303 24 718 Miscellaneous Gene Families AT1G01580 57.143 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00303 K00521 - gmx:100796460 1383.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00303 16 3197927 3201896 Gma16g00303 16 3197927 3201896 ECH
Gma07g00620 07 6359239 6363738 Gma16g00303 16 3197927 3201896 GST
Gma18g02175 18 55476164 55481142 Gma16g00303 16 3197927 3201896 PCT
Gma16g00303 16 3197927 3201896 Gma18g02175 18 55476164 55481142 PCT