Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02170 ATGGGTTTCAATTTGATTCTGTGGTGTCATCATCCTAATCTGGTTCTCAGTGTTTTGGTGCTCTTTTCCTGTTCCTTTTGCCTTTTCTCTGCAAATGATGAAGTGGGCACTGGTGAAGGTGAAACCTTTACTGTTTCAAGCTTCAGATACCCTGCGACTAGGCTCAGGCCCTTTGATTTGCGCTATATCAGAGTTGACTTGCCGCCATGGTTTTCTGCACTGTCTATAGCATTGAACTCAGATGTAGACCTTGATGTCTCAAGAATTGAAAGGGTTCCAATGAGCACATTGCCAATAATATGCTTTAGAGATGGAAGTCCTCCACTGCCAGATGCCTTAAATACATCTCTGAAGGATTCAGCCACCTCTGGTATAAATGATCTAGATGTGGAGCGGTGCTTTCCTATGCAGAAAAATATCACTATGAAACTGACAAACAATCAGATATCTCCAGGTGTTTGGTACATTGGTCTTTTCAATGGCATTGGACCTACAAGGACGCAGTCAAAGATGATTATCCGTGGTCCATCATTTTCCTTCATTGCTAATATAAGTGTGGAAGCATGCACAAATTCAATGATGAGGGGGGATTTCTGTAACAGTTCAGTTTATCCACTTTCATGTGCAGAATCTGATGTCTCTAATGCTTTGGAAGCTAAAATGAACAAGTCAATGTTGGAAAGTTTGGTGACCTGCAAAAGTAATTTTGAAGCTTTTTGTGTTCATGAAGGCATGCCAAACTTCTTCTCCCTGGATATTATGAATGTGGCAGAAGAAATTATCATTACGGCAGCAAATATCAGATTCAATGTTAGTCGATCAAATGATATTAGTTTAATGTGTTTTGTCCGCCATGGTGCAATGCCTTCTGTGACTTCGAATGATTATAACATTAATATTGCTAAAGGCCCACTGGTTATTCATTCACCATTAATTGGCCGTTGGTACATTAGTATAGTGCCAGTCAATCTTACAAAGACTCAGGATAACAGTGTAAGAGTTTGCTATTCAGTGGAATCTCAAGTGCTTCAATGCCCACTTGGGAAAGCTGGACCAAATTGTACAATGGATAGCTACTTGCTTCAGACATTTGTAAGGAGAGGTTCAACCCCCTTTGAGTCATATTATTTACCAGTTGTTGGAGGAGCATCGTATGATTCTGCCAATTTCCCTCTCGAGCCACTTTTAGACGACTCATCATACAGTGGAGAACCTGATAACATTTGGACTTACTTTCTTCTGAACATTCCTCGTGGTGCAGCTGGAGGAAATATTCACATACAGCTATCCTCAGATATGAAGATCAGTTATGAAGTGTATGCTAGATTTGGTGGATTACCATCTCTTGATAGCTGGGACTATTATTATGCTAACAAGACAAGGAGGAGTGATCCATCTATGTTTTTCACACTATATGACTCAAGTGATAACAAAGTTAATTTTTATATTATGTATGCTAGAGAAGGAACTTGGGGTATTGGTCTAAGACATCTTAATACCAGCAGTGATTCCATGAAAGGGCTTACTATCATGTCTATTTCACTTGAGCGATGCCCAAAACGATGCTCCTCTCATGGAGAATGTAAATTTTCTTTTGATGCTAGTGGATTGACATCGTACAGCTTCTGCTCTTGTGATCGAAACCATGGAGGCTTCGACTGTAGCATTGAGATTGTAACACATCAAGGACATGTACGGCAATCAATTTTTCTCATTGTATCAAATGCTGCAGCCATACTTCCTGCCTACTGGGCCCTTCGGAAGAAGGCATTAGCAGAATGGGTTTTATACACATCCAGTGGGATTTCAAGTGGACTATATCATGCGTGTGATGTAGGAACCTGGTGTGCATTGAACTATAATGTCTTACAGTTCATGGACTTCTGGCTCTCTTTCATGGCTGTGATTAGCACTTTCCTTTATCTAGCTACCATTGATGAAGTACTTAAGAGAGCAATCCACACAGCTGTTGCTATCCTTACTGCCCTAATGGCTGCAACAAAAGCAACCAGGTCTTCCAATGTTATTCTTGTAATTGTGATTGGTGCTCTTGGTTTGTTTATTGGATGGTTGATAGAAATCTCAACAAAGTATAGGTCCCTTTCCTTTTCAATTGGAATCTCATTTAATTTCTCTCACTGTTTCCAAACTATAAAGCAGTGGCTCTATAATCTTGTCAAGACACTTTTGAGACGGTACCACTGGGCATTTGCCTTGGCTGGTTTTCTTGCATTGGCCATGGCAGCAATAAGCTGGACACTTGAAACCAGTGAAACCTACTGGTTTTGGCATAGCATTTGGCATATTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAATATTGAGGATACTGAGAATCAGCTTCCTACAAATGGAAACTATGAATTGACTCATCAGGATTCACTTCCAAGAACTGTAGTCTCGTACGAAAATACCACTGTTGTACTGTGTTATGTCGACGAGAATAAAACAAACAAAAAATATTCAAAGATACAGAGAACCATAACCAAAGCCATAGCCACCTTCCTGAAACCCAATTCCTCAATAGTTTCTCACCCTTCTCTTCATCTACTCTTTCCAAAAGAATTGATGTATAAAGTCTGGTGGCCTCTGATGTGA 2631 0.3995 MGFNLILWCHHPNLVLSVLVLFSCSFCLFSANDEVGTGEGETFTVSSFRYPATRLRPFDLRYIRVDLPPWFSALSIALNSDVDLDVSRIERVPMSTLPIICFRDGSPPLPDALNTSLKDSATSGINDLDVERCFPMQKNITMKLTNNQISPGVWYIGLFNGIGPTRTQSKMIIRGPSFSFIANISVEACTNSMMRGDFCNSSVYPLSCAESDVSNALEAKMNKSMLESLVTCKSNFEAFCVHEGMPNFFSLDIMNVAEEIIITAANIRFNVSRSNDISLMCFVRHGAMPSVTSNDYNINIAKGPLVIHSPLIGRWYISIVPVNLTKTQDNSVRVCYSVESQVLQCPLGKAGPNCTMDSYLLQTFVRRGSTPFESYYLPVVGGASYDSANFPLEPLLDDSSYSGEPDNIWTYFLLNIPRGAAGGNIHIQLSSDMKISYEVYARFGGLPSLDSWDYYYANKTRRSDPSMFFTLYDSSDNKVNFYIMYAREGTWGIGLRHLNTSSDSMKGLTIMSISLERCPKRCSSHGECKFSFDASGLTSYSFCSCDRNHGGFDCSIEIVTHQGHVRQSIFLIVSNAAAILPAYWALRKKALAEWVLYTSSGISSGLYHACDVGTWCALNYNVLQFMDFWLSFMAVISTFLYLATIDEVLKRAIHTAVAILTALMAATKATRSSNVILVIVIGALGLFIGWLIEISTKYRSLSFSIGISFNFSHCFQTIKQWLYNLVKTLLRRYHWAFALAGFLALAMAAISWTLETSETYWFWHSIWHITIYTSSFFFLCSKANIEDTENQLPTNGNYELTHQDSLPRTVVSYENTTVVLCYVDENKTNKKYSKIQRTITKAIATFLKPNSSIVSHPSLHLLFPKELMYKVWWPLM 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02170 876 Pfam Protein of unknown function (DUF3522) 564 769 IPR021910 GO:0016021
Gma18g02170 876 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 14 809 IPR021910 GO:0016021
Gma18g02170 876 Gene3D - 385 558 - -
Gma18g02170 876 ProSitePatterns EGF-like domain signature 1. 543 554 IPR000742 -
Gma18g02170 876 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 14 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02170 Gma-Chr18 55416167 55429817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02170 - - gmx:100787532 1630.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02170 18 55416167 55429817 Gma09g02352 09 48901431 48915140 GST
Gma18g02170 18 55416167 55429817 Gma07g00629 07 6462007 6470274 PCT
Gma18g02170 18 55416167 55429817 Gma16g00311 16 3272631 3280452 PCT
Gma07g00629 07 6462007 6470274 Gma18g02170 18 55416167 55429817 PCT
Gma16g00311 16 3272631 3280452 Gma18g02170 18 55416167 55429817 PCT