Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00311 ATGCCTTTGAATTCGATTCCGTGGTGTCATCTCAAGCTGATTCTTCTCAGTGCGCTGTTACTTTTTTGTTGTTCTCTTGACCTCTGTTCTGCAATCACTGATTATGAGGATGATGTCTTCACTGTTTCCAGCTTCAGCTACCCTCAGACTACCCTTAGACCCTATGATTTGCGCTACATCAGAGTTGATATTATACCATGGTTTTCCGCAGTTTTCATATCATTGAACTCAGATGTAGACCTGGATGTTTCAAGAGTTGAAAGGGTGCCAAAAAGCTCTCTGCCACTATTATGCTTTAGAGATGGCAGCCCTCCTCTGCCAGATGCTTTAAATATATCTCTGAAGGATTCAGCTGTCACAGGAATAAATGGTCTTGAGGTCGAGCAGTGCTTTCCTATGGAGAAAAATATCACTATGAAATTGACAAATGAACAGATATCTCCAGGTGCTTTGTACATTGGTCTTTTCAACGGCATTGGAGATACAAGAACACAATCGAAGATGATTATCCGAGGTTCAGCATACTCCTTCAGTGCCAATATAAGTGTGGAAGCATGCTCGAATTCAATGATGAGGGGGGAGTTATGTAACAGTACAATCTCTCCACTTTCATGCACAGCATTTGATGTCTATAATTCTATGAAGGCTACAGTGAAGAAGCCAATGATGGAAAATGCAATGACCTGCAAAAGTAACTTAGAAACATTTTGTGCTCAGGAAGGTGTACCAGAATTTTACTCCTTGGATATAACAAATATGGCAGAAGAATTGACCATTATGGCGCCAAATGTTACATTCAATACTACAGCTTCAAATAACATTTCTAGTGCAAATGATGTTAGTTTAATGTGTTTTGCTCGCCATGGTGCAATTCCTTCGGAGACTTTGCATGATTATTCTGGTGATTTAAATAAAGCCCCTCTGATTATCCGTTATCCACTGATTGGTCGTTTGTACATCAGTATATTACCAATTAATGTTAAAAAAAAGTTTGGAGGGACACAGGATGAAAATTTAAAAGTTTGCTATTCAATGGAATCACGAGTGCTTCAGTGCCCACTTGGAAAGGCTGGATCAAATTGCACAATGGACAGCTACACACTTCAGGTAGTATTGATTGCCAGATGCGTCTCTATATATACTTTTTGTGCTTTTTTTTATAAAGTTCTAAGGAGAGGTGCAACCCCCTTTGAATCATATTTTTTACCTGTGGCTATTGGTGAAGGAGCATCTTCTGCCAATTTTCCTCTTGAGCCACTTTTAAACAAGTCATCAAATGTGGGAGAAACTGGTGACATTTGGACTTATTTTACTTTGGATATTCCCCATGGTGCAGCTGGACGGAATATTCACATACGGCTATCTGCAGATGTGAAGATCAGTTATGAAGTCTATGCTAGATTTGGTGGATTGCCTTCTCTTGATAGCTGGGACTATTATTATGCTAACATGACAAGGAAGAGTGATCAATCTGTGTTTTTCATGCTATATGATTCAAGTGATGACAAAATTGACTTTTACATTATTTATGCTAGAGAAGGAACTTGGGGTATAGGTCTAAGACATCTTTATACCGGCAGTGATTCTTTGAAAGCACAAACTGTCATGTCTATTTCACTTGAAGGATGCCCTAAACAATGCTCCTCTCATGGAGATTGTAAATATTCTTTTGATGCCAGTGGATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGTGGCTTTGACTGTAGCATTGAAATTGTATCACATAAAGGGCATATACTACAATCAATTTTTCTCATTGGATCAAATGCTGCAGCCATACTTCCTGCCTATTGGTCCCTTCGGCAGAAGGCATTTGCAGAATGGGTTTTGTTCACATCCAGTGGCATTGCTAGTGCACTATATCATGCATGTGACGTTGGCACCTGGTGTGCATTGAACTTTAATGTTTTACAGTTCATGGACTTCTGGCTCTCTTTCATGGCTGTGGTTAGCACTTTTGTATACCTAGCTACAATTGACGAAGTATATAAGAGGGCAATCCACACAGCTGTTGCTATCCTCACTGCCCTTTTGGCTGCAACCAAGGCAACTAGGTCTTCCAATGTTGTTCTTGTCATTGTGATTGGGGCTCTTGGTCTTCTTATTGCATGGTTGATAGAGATCTCAAAAAAGTATAGGTCCATCTCCTTTTCATTTGGATTATCGCTAAGTTTCCTTCAAAGCTTGCAAACTATAAAGCAATGGTTCTGTAATCTGGTCAAGACACTTTTGAGACGGTTTCGCTGGGGATTTTTATTGGTTGGTTTCATTACATTGGCCATGGCAGGACTAAGCTGGACGCTCGAAACCAGTGCAAACTACTGGTTTTGGCATAGCTTTTGGCATGTTACAATATATACATCTTCATTCTTCTTCCTTTGCTCAAAAGCAAACATTGTTGATGCTGAAGATTCATCATCACCCTCAAGTGGAAACTATGCACTGACTCATCAGGATTCATTTCCAAGAGGTAAAAAGATATGGCTACTGAGTAGAACTAGAAATCAACATAAGAGTGAATTGTGA 2559 0.397 MPLNSIPWCHLKLILLSALLLFCCSLDLCSAITDYEDDVFTVSSFSYPQTTLRPYDLRYIRVDIIPWFSAVFISLNSDVDLDVSRVERVPKSSLPLLCFRDGSPPLPDALNISLKDSAVTGINGLEVEQCFPMEKNITMKLTNEQISPGALYIGLFNGIGDTRTQSKMIIRGSAYSFSANISVEACSNSMMRGELCNSTISPLSCTAFDVYNSMKATVKKPMMENAMTCKSNLETFCAQEGVPEFYSLDITNMAEELTIMAPNVTFNTTASNNISSANDVSLMCFARHGAIPSETLHDYSGDLNKAPLIIRYPLIGRLYISILPINVKKKFGGTQDENLKVCYSMESRVLQCPLGKAGSNCTMDSYTLQVVLIARCVSIYTFCAFFYKVLRRGATPFESYFLPVAIGEGASSANFPLEPLLNKSSNVGETGDIWTYFTLDIPHGAAGRNIHIRLSADVKISYEVYARFGGLPSLDSWDYYYANMTRKSDQSVFFMLYDSSDDKIDFYIIYAREGTWGIGLRHLYTGSDSLKAQTVMSISLEGCPKQCSSHGDCKYSFDASGLTSYSFCSCDRNHGGFDCSIEIVSHKGHILQSIFLIGSNAAAILPAYWSLRQKAFAEWVLFTSSGIASALYHACDVGTWCALNFNVLQFMDFWLSFMAVVSTFVYLATIDEVYKRAIHTAVAILTALLAATKATRSSNVVLVIVIGALGLLIAWLIEISKKYRSISFSFGLSLSFLQSLQTIKQWFCNLVKTLLRRFRWGFLLVGFITLAMAGLSWTLETSANYWFWHSFWHVTIYTSSFFFLCSKANIVDAEDSSSPSSGNYALTHQDSFPRGKKIWLLSRTRNQHKSEL 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00311 852 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 14 836 IPR021910 GO:0016021
Gma16g00311 852 ProSitePatterns EGF-like domain signature 1. 568 579 IPR000742 -
Gma16g00311 852 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 14 836 - -
Gma16g00311 852 Pfam Protein of unknown function (DUF3522) 589 794 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00311 Gma-Chr16 3272631 3280452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00311 - - gmx:100816545 1558.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00629 07 6462007 6470274 Gma16g00311 16 3272631 3280452 GST
Gma18g02170 18 55416167 55429817 Gma16g00311 16 3272631 3280452 PCT
Gma09g02352 09 48901431 48915140 Gma16g00311 16 3272631 3280452 PCT
Gma16g00311 16 3272631 3280452 Gma18g02170 18 55416167 55429817 PCT
Gma16g00311 16 3272631 3280452 Gma09g02352 09 48901431 48915140 PCT