Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02118 atggcatcagcaacaataagGAATGCAGTTGTCACGGGAGCAAACAAAGGGATAGGATTTGGAATATGCAAGCAATTGGTTTCTAATGGCATCACAGTGGTGCTAACAGCAAGGGATGAGAAAAGGGGTCTTGAAGCTGTTGAAAAGCTGAAAGAGTTTGGTGTGTCTGATCAAGTGGTGTTTCATCAGCTTGATGTGACTGACCCTAAAAGCATTGAATCCCTTGCAAATTTCATCAAAACCCAGTTTGGAAAACTTGATATCTTGGTGAATAATGCAGGAATTCATGGAGCATATGTTGACCGTGATGCTTTAGCTGCTGCTGGGGAAAAAGTTGCCAATGTTGATTGGAGAAAAATCTCAACTGAAAATTTTGAAGCTGCCGAAGCAGGCATTAGAACAAATTACTATGGAGTCAAATTAATGTGTGAAGCACTTATTCCCCTTCTAGAATTGTCAGGCACACCAAGGATTGTCAATGTTTCCTCCTCCATGGGGAAGTTGGAGAAAATACCAAATGCATGGGCTAGAGGAGCCCTAAGTGATGCTGAGAGCCTAACAGAAGAAAAGGTGGATGAGGTTTTGAATCAGTTTCTAAAAGATTTTAAAGAGGGTTCATTAGAAACCAAAGGGTGGCCACATGCTTTTTCTGCATATATAGTCTCAAAAGCTGCTTTGACTGCCTACACAAGGATTCTTGCTAAGAAGTACCCATCTTTCTGCATCAATGCTGTTTGCCCTGGCTTTGTGAAAACAGATCTCAACTACAATACTGGCTATCTTAGTGTTGATGAAGGTGCTGAAAGTGTTGTAAGGTTGGCTCTGCTACCTAATGGAGGTCCTTCTGGTCTATTCTTTTCTCGAAGTGAAGTGGCACCATTCTGA 885 0.4079 MASATIRNAVVTGANKGIGFGICKQLVSNGITVVLTARDEKRGLEAVEKLKEFGVSDQVVFHQLDVTDPKSIESLANFIKTQFGKLDILVNNAGIHGAYVDRDALAAAGEKVANVDWRKISTENFEAAEAGIRTNYYGVKLMCEALIPLLELSGTPRIVNVSSSMGKLEKIPNAWARGALSDAESLTEEKVDEVLNQFLKDFKEGSLETKGWPHAFSAYIVSKAALTAYTRILAKKYPSFCINAVCPGFVKTDLNYNTGYLSVDEGAESVVRLALLPNGGPSGLFFSRSEVAPF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02118 294 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 1 294 - -
Gma18g02118 294 Gene3D - 3 294 - -
Gma18g02118 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Gma18g02118 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 164 IPR002347 -
Gma18g02118 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 219 238 IPR002347 -
Gma18g02118 294 Pfam short chain dehydrogenase 8 168 IPR002347 -
Gma18g02118 294 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Gma18g02118 294 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Gma18g02118 294 PRINTS Glucose/ribitol dehydrogenase family signature 150 166 IPR002347 -
Gma18g02118 294 PRINTS Glucose/ribitol dehydrogenase family signature 219 238 IPR002347 -
Gma18g02118 294 PRINTS Glucose/ribitol dehydrogenase family signature 238 255 IPR002347 -
Gma18g02118 294 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 294 - -
Gma18g02118 294 CDD carb_red_PTCR-like_SDR_c 7 294 IPR045313 GO:0016616
Gma18g02118 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 279 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02118 Gma-Chr18 54891182 54894393 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02118 10 259 Acyl Lipid Metabolism Gene Families AT1G24360 22.925 8.58e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02118 K15095 - gmx:106797124 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02118 18 54891182 54894393 Gma18g02118 18 54891182 54894393 ECH
Gma18g02118 18 54891182 54894393 Gma07g00674 07 6988124 6995475 PCT
Gma07g00675 07 7006319 7009062 Gma18g02118 18 54891182 54894393 PCT