Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00674 ATGGGAGAAACTACAGAAAGGTATGCAGTTGTGACAGGTGCAAATAAAGGAATTGGATTAGAGATAGTTAGACAATTAGCTTCAGCTGGAATCAAGGTGGTGCTCACTGCAAGAAATGAAGAGAGGGGTATCCAAGCACTGCAAACACTCAAGGACTCGGGTCTATCTCACCTTGTACTGTTTCATCAAGTTGATGTGGCTGATGCAACAAGCGTAGCTTCTCTGGCAGATTTTATCAAATCTAAATTTGGAAAACTTGATATTCTGGTTAACAATGCTGGGATTCTTGGAGCTGTAATTAAAGACACTGATTCATTCACTTCACTTCTCTTGAAGCGTGGGGCAGCACCAGAAGATGGGACAAAGGCAATCACTCAATCATATGAGTTGGCTAAAGAATGCTTGCAAATAAATTACTATGGTGCTAAAACAACTGTAGAATCCCTTCTGCCCCTCCTCCAGTTATCTGATTCACCGAGAATTGTGAATGTATCATCAACTATGGGGCAGTTAGAGAGTTTGCCAAAAGGATCATGGGCTAGAGAAGTCTTCAGTGATGCCAATATCATCACTGAAGAGAAAGTGGATGAAATATTGAAGAAGTTTTTGAGAGATTTCCAAGAAGGCTCATTAGAAAGTAATGGGTGGCCAAGACATCTGGGTGCTTATATTGTCTCTAAAGCTGCTATGAATGCGTATACTAGAATCCTTGCTAAGAAATACCCTTCATTCTGCATCAATAGTGTTTGCCCTGGTTATGTCAAGACAGATATAACTTCCAACACTGGCCTCTTAACAGTTGAAGAAGGTGCAGCTAGTCCTGTGAGGCTAGCATTGCTTCCCAATGGTAGTCCATCTGGCCTTTTCTATTACCGGAGTGATGTGGCTTCCTTTTGA 897 0.4158 MGETTERYAVVTGANKGIGLEIVRQLASAGIKVVLTARNEERGIQALQTLKDSGLSHLVLFHQVDVADATSVASLADFIKSKFGKLDILVNNAGILGAVIKDTDSFTSLLLKRGAAPEDGTKAITQSYELAKECLQINYYGAKTTVESLLPLLQLSDSPRIVNVSSTMGQLESLPKGSWAREVFSDANIITEEKVDEILKKFLRDFQEGSLESNGWPRHLGAYIVSKAAMNAYTRILAKKYPSFCINSVCPGYVKTDITSNTGLLTVEEGAASPVRLALLPNGSPSGLFYYRSDVASF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00674 298 CDD carb_red_PTCR-like_SDR_c 7 295 IPR045313 GO:0016616
Gma07g00674 298 Pfam short chain dehydrogenase 8 171 IPR002347 -
Gma07g00674 298 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 298 - -
Gma07g00674 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 298 - -
Gma07g00674 298 Gene3D - 2 298 - -
Gma07g00674 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 284 IPR036291 -
Gma07g00674 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Gma07g00674 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 IPR002347 -
Gma07g00674 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Gma07g00674 298 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Gma07g00674 298 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Gma07g00674 298 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Gma07g00674 298 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00674 Gma-Chr7 6988124 6995475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00674 9 260 Miscellaneous Gene Families AT2G29150 28.405 2.86e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00674 K15095 - gmx:100804943 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00674 07 6988124 6995475 Gma07g00674 07 6988124 6995475 ECH
Gma18g02118 18 54891182 54894393 Gma07g00674 07 6988124 6995475 PCT