Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02001 ATGGGGAGTTGTGTGTCTAAGAATAAAGCTAGGGATAATGATTCTGATCATAATGTGGATTTTGCTGCTGGGAATGTGaaacttattaccaccaaagaagcgtgggaccaatatttggaagaagcaaGGAGGGATGGCAAAATTGTGATTGCAAATTTCAGTGCAGCATGGTGTGGTCCTTGTAAGATGATTGCACCATATTACTGTGAGTTATCTGAGAAATACACTTCTATGATGTTCTTGGTAGTTGATGTGGATGAACTAACTGACTTTAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGACAACAACTTGACAAACTTGTAGGAGCCAACAAGCCAGAACTGCAGAAGAAGATTGTTGCCATTAATGATTCGCTTCCCGAATATAAGCAGTGA 420 0.3548 MGSCVSKNKARDNDSDHNVDFAAGNVKLITTKEAWDQYLEEARRDGKIVIANFSAAWCGPCKMIAPYYCELSEKYTSMMFLVVDVDELTDFSTSWDIKATPTFFFLKDGQQLDKLVGANKPELQKKIVAINDSLPEYKQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02001 139 Gene3D Glutaredoxin 1 137 - -
Gma18g02001 139 PRINTS Thioredoxin family signature 49 57 - -
Gma18g02001 139 PRINTS Thioredoxin family signature 57 66 - -
Gma18g02001 139 PRINTS Thioredoxin family signature 96 107 - -
Gma18g02001 139 Pfam Thioredoxin 29 127 IPR013766 -
Gma18g02001 139 CDD TRX_family 33 127 - -
Gma18g02001 139 PANTHER THIOREDOXIN H9 1 136 - -
Gma18g02001 139 ProSiteProfiles Thioredoxin domain profile. 17 132 IPR013766 -
Gma18g02001 139 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Gma18g02001 139 PANTHER THIOREDOXIN 1 136 - -
Gma18g02001 139 SUPERFAMILY Thioredoxin-like 22 128 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02001 Gma-Chr18 53289650 53293868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02001 K03671 - gmx:100813401 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02001 18 53289650 53293868 Gma18g02001 18 53289650 53293868 ECH
Gma18g02001 18 53289650 53293868 Gma09g02495 09 50277484 50281390 GST
Gma18g02001 18 53289650 53293868 Gma03g00020 03 289667 292871 PCT
Gma03g00020 03 289667 292871 Gma18g02001 18 53289650 53293868 PCT