Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00020 ATGGTCTTTTGCTTGCAACATCTAGAACCTATACTTTTACATCTTCAGTTTGCCTTCCTGGACTGCATTGCTCAAGCGGATGATGATTCTGATCATAATGTGGAGTTTGCTTCTGGGAATGTGCAAGTTATTACTACCAAAGAATCTTGGGACCAAAAGTTGGAACAAGCGAGGAGGGACAGTAAAATTGTTATTGCAAATTTCAGTGCCACATGGTGTGGTCCTTGTAAGATGATTGCACCATATTATTGCGAGTTGTCCGAGAAATACCCATCTATCATGTTCTTATTAGTCGATGTGGATGAACTAGCTGACTTCAGCACTTTATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGAAAAGAGGTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGGAGAAGAAGATTGTTGTGATTAATGATGCAGTGCCTCATAAGCAATAG 462 0.4069 MVFCLQHLEPILLHLQFAFLDCIAQADDDSDHNVEFASGNVQVITTKESWDQKLEQARRDSKIVIANFSATWCGPCKMIAPYYCELSEKYPSIMFLLVDVDELADFSTLWDIKATPTFFFLKDGKEVDKLVGANKPELEKKIVVINDAVPHKQ 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00020 153 Pfam Thioredoxin 43 142 IPR013766 -
Gma03g00020 153 PRINTS Thioredoxin family signature 64 72 - -
Gma03g00020 153 PRINTS Thioredoxin family signature 72 81 - -
Gma03g00020 153 PRINTS Thioredoxin family signature 111 122 - -
Gma03g00020 153 PANTHER THIOREDOXIN 24 151 - -
Gma03g00020 153 ProSitePatterns Thioredoxin family active site. 65 83 IPR017937 -
Gma03g00020 153 Gene3D Glutaredoxin 20 149 - -
Gma03g00020 153 ProSiteProfiles Thioredoxin domain profile. 23 147 IPR013766 -
Gma03g00020 153 PANTHER THIOREDOXIN H9 24 151 - -
Gma03g00020 153 SUPERFAMILY Thioredoxin-like 36 142 IPR036249 -
Gma03g00020 153 CDD TRX_family 48 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00020 Gma-Chr3 289667 292871 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00020 K03671 - gmx:100527258 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02001 18 53289650 53293868 Gma03g00020 03 289667 292871 PCT
Gma09g02495 09 50277484 50281390 Gma03g00020 03 289667 292871 PCT
Gma03g00020 03 289667 292871 Gma18g02001 18 53289650 53293868 PCT
Gma03g00020 03 289667 292871 Gma09g02495 09 50277484 50281390 PCT