Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01958 ATGGAAATGGAAGCCGCTGACGTGGTCGAAACGACGACGAATCATGCCGAACGGGGTTTGGAGAAGAAGAACAACAAGAGTGGTTTGAGAACGGAGATTGATACTTCAGCGCCCTTTGAATCGGTGAAGGAAGCTGTTACTATGTTCGGGGGTGGTTACTGGAAATCACCCCTTCACAGTAATATTACGTGTGTGGCTTCTGGTTCTGAGcaccacagagaagaggtcagcgctgaaaaactggaggagcaggctgtggtactggagaaagaactgatcttgaaagaaagggaaactcttgatgtgttgaaagaactggaaaGTACCATGGAAGGGAGAATGGGACTGTTGTTTCTTGTTGTATTAGGTGCTGCTTGGGCATGTGATGCAAGGGAACTGGCTAACTCTGAAACTTCTGAACTAAGCATAAAACCGGATGTGTGTGCACTTTGTGAGGAATATATTACCAAGGCACTTGATTATCTACATGAAAACAAGACTGAGACAGAGATCATTAGTATCCTGCACAACACTTGCCACCAGCTTCCTTCTTTCAAGCAGAAGTGCGTTGCTTTGGTGGACTATTATGTTCCTCTTTTCTTCTCGGAAGTAGCTACAATTCAGCCTGGAGAATTCTGCCACAAAGTCAATCTCTGTCAGGACATTGCACATATTTCCTTGAAAGTTCAAGAAGATAGCTGTGAGTTTTGCAAAGATACTGTTTCAACTCTATTGGAGAAGTTGAAGGAGAGTGACACTAAGCTAGAGATAATTGAGACATTACTGAAGGTGTGCAATTCAGTGGAGAAGTATGCAAATAAGTGCAAGAGAATGGTTTTCGAGTATGGACCCTTGATTTTTGACCATGCAGAGAAAATCCTAGAGACGACAGATATATGCAATATAATACATGCCTGCAAATCTTCAGATGTAGCTGGACAGCAAGCCTTTCTTTCGTTACACACACTCCAGTCACACACTTCTTCCTCTATCCATTTCTCTAACTCTGACCATGCAATTGGCGTTGATCTCATTGCATTCTCTGTAGAAATGACGAACAAGGCCAAAGGAAAAGACAAGGAGGTCACCGGAAAAGGTTCTACCGACAGGTGCAAGGACGCCTTCGACGATGACAAGACCGGTGGCGGCTGA 1152 0.3976 MEMEAADVVETTTNHAERGLEKKNNKSGLRTEIDTSAPFESVKEAVTMFGGGYWKSPLHSNITCVASGSEHHREEVSAEKLEEQAVVLEKELILKERETLDVLKELESTMEGRMGLLFLVVLGAAWACDARELANSETSELSIKPDVCALCEEYITKALDYLHENKTETEIISILHNTCHQLPSFKQKCVALVDYYVPLFFSEVATIQPGEFCHKVNLCQDIAHISLKVQEDSCEFCKDTVSTLLEKLKESDTKLEIIETLLKVCNSVEKYANKCKRMVFEYGPLIFDHAEKILETTDICNIIHACKSSDVAGQQAFLSLHTLQSHTSSSIHFSNSDHAIGVDLIAFSVEMTNKAKGKDKEVTGKGSTDRCKDAFDDDKTGGG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01958 383 MobiDBLite consensus disorder prediction 14 29 - -
Gma18g01958 383 Pfam Saposin-like type B, region 1 146 183 IPR007856 GO:0006629
Gma18g01958 383 Pfam Saposin-like type B, region 1 232 267 IPR007856 GO:0006629
Gma18g01958 383 Gene3D - 229 309 - -
Gma18g01958 383 ProSiteProfiles Saposin B type domain profile. 230 310 IPR008139 -
Gma18g01958 383 PANTHER SAPOSIN-RELATED 110 325 - -
Gma18g01958 383 SUPERFAMILY Saposin 146 219 IPR011001 -
Gma18g01958 383 Coils Coil 71 98 - -
Gma18g01958 383 Pfam Saposin-like type B, region 2 187 219 IPR008138 -
Gma18g01958 383 Pfam Saposin-like type B, region 2 274 306 IPR008138 -
Gma18g01958 383 SUPERFAMILY Saposin 232 309 IPR011001 -
Gma18g01958 383 ProSiteProfiles Saposin B type domain profile. 144 223 IPR008139 -
Gma18g01958 383 MobiDBLite consensus disorder prediction 1 31 - -
Gma18g01958 383 Gene3D - 144 221 - -
Gma18g01958 383 PANTHER SAPOSIN-RELATED 110 325 - -
Gma18g01958 383 SMART sapb_4 146 219 IPR008139 -
Gma18g01958 383 SMART sapb_4 232 306 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01958 Gma-Chr18 52810213 52823351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01958 K12382 - gmx:100802366 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01958 18 52810213 52823351 Gma01g01345 01 46902673 46905515 PCT
Gma01g01345 01 46902673 46905515 Gma18g01958 18 52810213 52823351 PCT