Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01345 ATGGAAGAAGTTCCCGACACGGCGGCGAACCGGTCCGAGCCGGGGCTCAGGGCGGAGATCGACACATCGGCGCCGTTCGAATCGGTGAGGGAAGCCGTCACGCGATTCGGTGGAGTTGGGTATTGGAAACCCATTCTCAACGGTCTTAGTAACAAGCATTTTGCTGCCACTGAGCCACATCACACAGAAGAGCTTGACCCTGAAAAACTGGAGGAGCAAGCTACTGTATTGGAGAAAGAGCTGATCCTGAAAGAAAGGGAAACACTTGATGTCTTAAAAGAGTTGGAAAGTACCAAAAGGCTTGTAGAGAATTTGAAATCAAAGCTACAGAAAGAAGAATCGGAAGCGAATTTGAATTTTCAGACAAGTGTTTGCGAAAATATATTGTCTGTTAAGGAGGATGAGAAAGAAGATAAGGAAAACGGAATGAGTAATGTTGTTCAGGATTCAAAGGAAGGTTGTACCCCCTATACTTCATCATCCCCGGGTTTAATATTAATGGAATTGAAGCAAGCGAAATTCAATCTGAACAGAACTACAAGTGATATTGCTGATGTTCGTGCTTCTGTTGAATCGCTCAATAAGAAGTTAGAGAAGGAAAGACTATCACTTGAGAAAACGCGCAAGAGGTTAACTCAGAATTCTTCAAAGATATGTTCTCTTGAGGAAGAGCTAAACCAGACAAAACTAAAACTGCTAGTGGCAAAGGATGCCGGTTTGGATAACCCTTCGGATATTACTAGAGAGCTCCAGCGGCTGAGTTCTGAGGCCGAACATTTCAAGAAAATGGGAGAAGCTGCTAAATCAGAAGTCATGAAAGCAATGTCTGAGATTGAACAAACAAAAGCTATGATAAAAACTGCTGAAATCAGGTTGGTTGCTGCCCGAAAAATGAAGGAAGCTGCCAGAGCAGCAGAAGCTGCCGCCCTTGCAGAGATCAAAGCTTTGTCTCATCATGAGAATTCACCTGGAGATTGTGTGGAAAAGCATGATGGAGTGACCCTTTCCTTTGAAGAGTATACTGCTCTAACCTGCAAGGCGCGAGAGGCCGAGGAGCAATCTAAGAAGAGAGTTGTAGATGCTATGCTTCTAGTTGATGAAGCAAATGTATCTAAAATGGACATTTTGAAAAAGGTAGAGGAAGCCACCGAAGAAGTTAAAACCAGCAAGAAGGCCCTTGATGAGGCTCTTGAAAGGGTAGAGGCTGCTAATCAAGGAAAGCTAGCAGTTGAAGAGGCGTTAAGGAAGTGGCGGTCGGAGGGTCACAAACGGCGTTCTTCCATACATAACTCTATCAAGTTTAAAAATGCTTACCCCTCTCACCAATGGAAGGAATCTCGGTTAATCGATGTCAATGGGTTGAATCTGGTAAATGATGAGGTCAAGCCGGTTCTAAAGCCGACACTGTCCATAGGACAAATATTGAGCAGGAAGTTGATGATGCCGGAAGAGTATGAAGCCAGTGGAATGATTAGAGAAAGAAGCTCGGCGAAACGGAAGGTGTCTCTTGGTCAGATGCTAGGCAAACAAAACGGGGATTCATCCTTTGACAGGCAAGCTGAGAAGGAAAATGGTCAGAAACCGTTTTCTGCAAAGAGAAAGAAATTTGGATTTGGTCGATTCTCCCTACTTTTGACAAAACAACAAAAGAAGAAGAAGCCAACACTGAACTTGAGGTGA 1680 0.4405 MEEVPDTAANRSEPGLRAEIDTSAPFESVREAVTRFGGVGYWKPILNGLSNKHFAATEPHHTEELDPEKLEEQATVLEKELILKERETLDVLKELESTKRLVENLKSKLQKEESEANLNFQTSVCENILSVKEDEKEDKENGMSNVVQDSKEGCTPYTSSSPGLILMELKQAKFNLNRTTSDIADVRASVESLNKKLEKERLSLEKTRKRLTQNSSKICSLEEELNQTKLKLLVAKDAGLDNPSDITRELQRLSSEAEHFKKMGEAAKSEVMKAMSEIEQTKAMIKTAEIRLVAARKMKEAARAAEAAALAEIKALSHHENSPGDCVEKHDGVTLSFEEYTALTCKAREAEEQSKKRVVDAMLLVDEANVSKMDILKKVEEATEEVKTSKKALDEALERVEAANQGKLAVEEALRKWRSEGHKRRSSIHNSIKFKNAYPSHQWKESRLIDVNGLNLVNDEVKPVLKPTLSIGQILSRKLMMPEEYEASGMIRERSSAKRKVSLGQMLGKQNGDSSFDRQAEKENGQKPFSAKRKKFGFGRFSLLLTKQQKKKKPTLNLR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01345 559 Coils Coil 92 115 - -
Gma01g01345 559 Coils Coil 365 399 - -
Gma01g01345 559 Pfam Weak chloroplast movement under blue light 18 117 IPR008545 -
Gma01g01345 559 Pfam Weak chloroplast movement under blue light 167 424 IPR008545 -
Gma01g01345 559 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 9 553 - -
Gma01g01345 559 MobiDBLite consensus disorder prediction 508 534 - -
Gma01g01345 559 MobiDBLite consensus disorder prediction 1 23 - -
Gma01g01345 559 Gene3D - 165 321 - -
Gma01g01345 559 MobiDBLite consensus disorder prediction 515 530 - -
Gma01g01345 559 Coils Coil 271 305 - -
Gma01g01345 559 Coils Coil 176 214 - -
Gma01g01345 559 PANTHER MYOSIN HEAVY CHAIN-LIKE 9 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01345 Gma-Chr1 46902673 46905515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01345 - - gmx:100783770 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01345 01 46902673 46905515 Gma01g01345 01 46902673 46905515 ECH
Gma18g01958 18 52810213 52823351 Gma01g01345 01 46902673 46905515 PCT
Gma01g01345 01 46902673 46905515 Gma18g01958 18 52810213 52823351 PCT