Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01814 ATGAAAACCACTGCAATCACTATAAATCCCTCACTCTCTCCACCCTTTTGTTCCAAAGCCACTACCCCTCCTTCTTGTTCTTCATCATCTTCTTCGTTCCCTCCTAGTTTCCCACGTTTTCACTTGTCGGGAGCAAAACCCATTTCTCTTTCTTGCAGAGGAACACGATTGTGCTCCTTGAAAGGGTCTAAAACTCTTTGGGGTAGAAAAAGTTTTGTGCTTGGGGCTGGAAACATGACCATGGCAGAGGTTGATTCTCATGAAGAGGGGGAGAACGAGGGTGCTTTGGTTGGCTCTGAGAATGAGAACAATTCAAGGCCTCGGAGAATTGCTCTCTTTGTCGAGCCTTCTCCCTTTGCATATGTCTCAGGCTACAAAAACCGGTTTCAGAACTTTATTAGATGCCTACGTGAAATGGGTGATGAGGTGATGGTCGTGACAACACATGAAGGAGTGCCACAGGAATTTTATGGAGCCAAATTAATTGGATCTTGGAGCTTTCCCTGCCCTTTGTATCAGAAGGTACCCCTCTCCTTGGCACTTAGTCCAAGAATAATTTCGGAGGTAGCCCGGTTTAAGCCTGACATAATACATGCATCATCGCCAGGCATAATGGTTTTTGGAGCTCTTATCATTGCAAAACTTTTGTGTGTTCCTATTGTCATGTCCTATCATACCCATGTACCAGTGTACATTCCAAGATATACCTTTAGCTGGCTGGTGAAACCCATGTGGTTGATCATAAAATTTCTTCACAGAGCAGCTGATCTGACTCTGGTGCCATCTGCTGCCATTGCGGGGGATCTCCTAGCAGCTAGAGTCACAGCAGCTAACAAGATTCGTCTTTGGAACAAGGGTGTTGATTCTGAAAAATTCCATCCCAAATACCGCTCCCATGAAATGCGATTAAGACTAAGCAATGATGAACCTGACAAACCCTTGATAATTCATGTTGGACGGCTTGGAGTAGAGAAGAGTTTAGATTTTCTGAAAAGGCTCATGGATAGGCTTCCTGATGCCCGAATTGCTTTCGTTGGTGATGGACCATACAGGGAAGAACTAGAGAAAATGTTTGAAGGTATGCCAGCAGTATTCACTGGAATGTTAGGAGGAGAAGAACTGTCCCAAGCATATGCCAGTGGAGATGTATTTGTCATGCCTTCAGAGTCAGAGACGCTTGGTTTTGTAGTTTTGGAGGCGATGTCTTCAGGGATACCTGTGGTGGCGGCACGTGCTGGAGGTATTCCTGATATAATCCCTGCAGATCAAGATGGTAAAACTAGCTATCTGTATGATCCACGAGATCTTGAAGACTGCTTGAGCAAACTAAGGCCCCTTTTGCACAACAAAGAGTTGAGAGAAACCATGGGTAAAGCTGCACGTGAAGAGATGGAAAAGTATGATTGGAAGGCAGCCACGCGAAAGATTCGCAACGAACAATACAACGCTGCCATTTGGTTCTGGCGCAAGAAAAGAGCCCAACTATTGAGACCCTTCCAACGGCTGGCAAAACGTTTTTTCCCATCCCCACAAGTCAACTACAGGTGA 1548 0.4535 MKTTAITINPSLSPPFCSKATTPPSCSSSSSSFPPSFPRFHLSGAKPISLSCRGTRLCSLKGSKTLWGRKSFVLGAGNMTMAEVDSHEEGENEGALVGSENENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIRCLREMGDEVMVVTTHEGVPQEFYGAKLIGSWSFPCPLYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWNKGVDSEKFHPKYRSHEMRLRLSNDEPDKPLIIHVGRLGVEKSLDFLKRLMDRLPDARIAFVGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGFVVLEAMSSGIPVVAARAGGIPDIIPADQDGKTSYLYDPRDLEDCLSKLRPLLHNKELRETMGKAAREEMEKYDWKAATRKIRNEQYNAAIWFWRKKRAQLLRPFQRLAKRFFPSPQVNYR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01814 515 Pfam Glycosyl transferases group 1 310 462 IPR001296 GO:0016757
Gma18g01814 515 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 19 514 - -
Gma18g01814 515 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 19 514 - -
Gma18g01814 515 Pfam Glycosyltransferase Family 4 127 290 IPR028098 -
Gma18g01814 515 Gene3D Glycogen Phosphorylase B; 305 467 - -
Gma18g01814 515 CDD GT4-like 109 481 - -
Gma18g01814 515 Gene3D Glycogen Phosphorylase B; 109 304 - -
Gma18g01814 515 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 110 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01814 Gma-Chr18 50396711 50401648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01814 3 430 Glycosyltransferase AT5G01220 70.766 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01814 K06119 - gmx:100807850 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01814 18 50396711 50401648 Gma18g01814 18 50396711 50401648 ECH
Gma18g01814 18 50396711 50401648 Gma07g01346 07 17829374 17832101 GST
Gma18g01814 18 50396711 50401648 Gma01g01131 01 40189997 40195264 PCT
Gma01g01131 01 40189997 40195264 Gma18g01814 18 50396711 50401648 PCT