Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01131 ATGAACAACTCTACGTCTCTCTCTATAAATCCCTCTCTCACTCCTCCTTTTCGTTTACCTGCCACACAAACAACAACCCTATCTTCTTCTTTTTCCACTTTCCCTCAGAACTCTCTTAGATTTAGCTGTTTCCAATCGTTTCGACCAAAACCCATTAACCCCTTTTGCAGAAAAGCAAGATTGTGCTCTCTGCAAGGGTCAACGAGTGTGAAAAGCAGAAAAAGTTTGGTGCTTTGTGCTACCAACATGACTATAGCAGAGGATAGTTTGTTGCAGGTGGTGGAGGAGGAAGAGGGTCCTCCTGATTTTGCTTTGCTTGATCCTGAGGACAATTCTAGGCCTCGTAGAATTGCTCTCTTCGTTGAGCCTTCTCCTTTTGCATATGTCTCAGGATACAAAAACCGTTTCCAGAATTTTATAAAATACCTTCGTGAAATGGGAGATGAGGTGATGGTCGTGACAACACATGAAGGAGTACCCAAGGAATTTTATGGAGCCAAATTAATTGGATCCCGAAGCTTCCCTTGTCCCTGGTATCAAAAGGTACCCCTCTCTTTGGCACTTAGTCCAAGAATAATTTCTGCTGTTGCTGAGTTTAAGCCTGACATAATACATGCATCATCACCAGGCATAATGGTTTTTGGTGCCCTTATCATTGCAAAGCTTCTGAGTGTTCCTATTGTCATGTCCTATCACACCCACGTACCAGTATACATTCCAAGATACACCTTTAGCTGGCTGGTGCAACCCATGTGGTGGGTCATAAAATTTCTGCATAGAGCAGCTGATCTTACACTGGTGCCATCAGCTGCCATTGCAAAAGATCTTGAAGAAGCTAGAGTAACAGCAGCGAACAAGATTTGTCTTTGGAACAAGGGTGTTGATTCTGAAAGTTTCCATCCGCGATTCAAGTCCCATGAAATGCGATTAAGACTGAGCAATGGTGAACCTGAGAAGCCCTTGATAGTTCATGTTGGACGGCTTGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAGTCTCATGGATAGGCTTCCTGAAGCACGAATTGCCTTTATCGGAGATGGACCTTACAGAGAGGAACTAGAGAAAATGTTTGAAGGCATGCCAGCAGTGTTCACAGGAATGTTAGGAGGGGAAGAACTATCTCAAGCCTATGCAAGTGGAGATGTCTTTGTGATGCCGTCAGAGTCAGAGACACTTGGCCTTGTTGTTCTGGAGGCCATGTCATCAGGAATCCCTGTGGTGGGAGCGCGTGCCGGTGGCATTCCAGACATAATTCCAGAAGACCAAGATGGCAAAATTGGTTACCTCTATACACCAGGTGATCTTGAAGATTGCCTGAGCAAACTAAAGCCGCTTTTGGATGACAAAGAGTTGAGAGAAACCATGGGAGAAGCTGCACGTTTGGAGATGGAGAAGTATGATTGGAGAGCAGCCACTCAGAAGATTCGCAATGAAAACTACAATGCTGCCATTTGGTTCTGGCGCAAGAAAAGGGCTCAACTCTTGAGACCCTTTCAATGGTTGGCTCAACGTATTTTCCATTCTCCAGATCCAGAAGCCAACACATAG 1572 0.4459 MNNSTSLSINPSLTPPFRLPATQTTTLSSSFSTFPQNSLRFSCFQSFRPKPINPFCRKARLCSLQGSTSVKSRKSLVLCATNMTIAEDSLLQVVEEEEGPPDFALLDPEDNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISAVAEFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIAKDLEEARVTAANKICLWNKGVDSESFHPRFKSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSLMDRLPEARIAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLDDKELRETMGEAARLEMEKYDWRAATQKIRNENYNAAIWFWRKKRAQLLRPFQWLAQRIFHSPDPEANT 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01131 523 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 24 518 - -
Gma01g01131 523 Gene3D Glycogen Phosphorylase B; 294 474 - -
Gma01g01131 523 Pfam Glycosyltransferase Family 4 134 297 IPR028098 -
Gma01g01131 523 Gene3D Glycogen Phosphorylase B; 131 478 - -
Gma01g01131 523 CDD GT4-like 116 486 - -
Gma01g01131 523 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 117 484 - -
Gma01g01131 523 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 24 518 - -
Gma01g01131 523 Pfam Glycosyl transferases group 1 317 469 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01131 Gma-Chr1 40189997 40195264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01131 74 437 Glycosyltransferase AT5G01220 79.670 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01131 K06119 - gmx:100780899 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01131 01 40189997 40195264 Gma01g01131 01 40189997 40195264 ECH
Gma18g01814 18 50396711 50401648 Gma01g01131 01 40189997 40195264 PCT
Gma07g01346 07 17829374 17832101 Gma01g01131 01 40189997 40195264 PCT
Gma01g01131 01 40189997 40195264 Gma18g01814 18 50396711 50401648 PCT
Gma01g01131 01 40189997 40195264 Gma07g01346 07 17829374 17832101 PCT