Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01712 ATGGCAGAAACAAAGTTGAGCTCCTTCAAAGACAAAAGATGGTCACTCCATGGCATGACAGCTCTAGTGACAGGAGGCACACGAGGCATAGGGTACGCAATAGCTGAAGAGTTAGCAGAATTTGGGGCAGCTGTGCATATTTGTGCACGTAAACAACAAGATATTGATAAATGTTTAGAAGAATGGAATAAGAAAGGACTTCCCATAACAGGGTCGGCATGTGATGTACTATCTCGTGACCAACGTGAAAATTTAATGAAAAATGTTGCTTCAATCTTTAACGGGAAGCTCAACATTCTGATAAACAATGCTGGAACAACTACACCTAAGAATCTCATAGATTATACTGCAGAAGATGTAACGACAATAATGGAAACTAATTTTGGGTCTAGTTACCACTTATGTCAACTAGCACATCCACTTCTAAAAGCATCTGGATATGGGAGCATAGTGTTTATATCCTCCATTGCAGGTCTGAAAGCTTTGCCTTACAGTTCTGTGTATGCATCCTCTAAAGGAGCTATGAATCAATTCACTAAGAACATAGCATTGGAATGGGCAAAGGATAATATTCGCGCAAATGCTGTGGCACCGGGGACTGTTAAGACTGTACTTCTGGATTCTATCATGAAAGCTGCTGCTGAAGCTGATAAAGCCGTTGAGTATATAGTGTCTCAAACACCAGTTGGTAGACTTGGAGATCCCGAGGACATATCACCACTGGTTGTTTTCCTTTGCCTTCCAGCTGCTTCATACATCACTGGCCAGATTATTACTGCGGATGGGGGTTACATAATTTAA 801 0.4132 MAETKLSSFKDKRWSLHGMTALVTGGTRGIGYAIAEELAEFGAAVHICARKQQDIDKCLEEWNKKGLPITGSACDVLSRDQRENLMKNVASIFNGKLNILINNAGTTTPKNLIDYTAEDVTTIMETNFGSSYHLCQLAHPLLKASGYGSIVFISSIAGLKALPYSSVYASSKGAMNQFTKNIALEWAKDNIRANAVAPGTVKTVLLDSIMKAAAEADKAVEYIVSQTPVGRLGDPEDISPLVVFLCLPAASYITGQIITADGGYII 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01712 266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 265 IPR036291 -
Gma18g01712 266 Gene3D - 3 266 - -
Gma18g01712 266 PANTHER TROPINONE REDUCTASE 1 265 IPR045000 GO:0016491
Gma18g01712 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Gma18g01712 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Gma18g01712 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Gma18g01712 266 Pfam Enoyl-(Acyl carrier protein) reductase 27 264 - -
Gma18g01712 266 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 155 183 IPR020904 GO:0016491
Gma18g01712 266 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Gma18g01712 266 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Gma18g01712 266 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Gma18g01712 266 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Gma18g01712 266 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Gma18g01712 266 PRINTS Glucose/ribitol dehydrogenase family signature 228 248 IPR002347 -
Gma18g01712 266 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01712 Gma-Chr18 47900752 47903450 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01712 11 266 Miscellaneous Gene Families AT2G29290 53.906 5.19e-101 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01712 K08081 - gmx:100306108 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01712 18 47900752 47903450 Gma18g01712 18 47900752 47903450 ECH
Gma18g01712 18 47900752 47903450 Gma12g00526 12 4365165 4372366 ECH