Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01383 ATGATGAATGCAACCTACATTATCAGTATTGCAAGAAAGCTTGGATGTTCAATATTCTTGCTTCCCGAAGACATCACTGAGGTGGTGAATCAAAACATGATCCTTACACTAACAGCTAGTATAATGTATTGGTTCTTAAAGCACCCTCTCGAGGAAAGAACAGTAGGAAATTCAGACAGTGAGAGTGGGAGTCAATTGGAAACTACATCAAATTCAACACTGGATGACTCTGCTTCTGATTCATCGGCAGAGGAGAAGGGGAGCATGTAA 270 0.4074 MMNATYIISIARKLGCSIFLLPEDITEVVNQNMILTLTASIMYWFLKHPLEERTVGNSDSESGSQLETTSNSTLDDSASDSSAEEKGSM 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01383 89 PANTHER FIMBRIN/PLASTIN 1 89 IPR039959 GO:0051015|GO:0051017
Gma18g01383 89 ProSiteProfiles Calponin homology (CH) domain profile. 1 46 IPR001715 GO:0005515
Gma18g01383 89 SUPERFAMILY Calponin-homology domain, CH-domain 2 48 IPR036872 -
Gma18g01383 89 PANTHER ACTIN-BINDING CALPONIN-LIKE (CH) DOMAIN PROTEIN 1 89 - -
Gma18g01383 89 Gene3D - 1 43 IPR036872 -
Gma18g01383 89 MobiDBLite consensus disorder prediction 56 78 - -
Gma18g01383 89 MobiDBLite consensus disorder prediction 54 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01383 Gma-Chr18 28829575 28830392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01383 2 48 EF-hand Containing Proteins AT5G55400 76.596 1.70e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01383 - - gmx:100805133 140.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01383 18 28829575 28830392 Gma03g00828 03 29977689 29985690 PCT
Gma18g01383 18 28829575 28830392 Gma16g00729 16 9453222 9464431 PCT
Gma03g00828 03 29977689 29985690 Gma18g01383 18 28829575 28830392 PCT
Gma16g00729 16 9453222 9464431 Gma18g01383 18 28829575 28830392 PCT