Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01293 ATGGCTTTGGATGTGTTTCCATGGACAAAATCAAAACCCAGGAAGACACAAACTCCTTCTGTTGGTAGAACAAGACAACACAAATGTGGACAAACACACACATGGAAACGAAGTTTCCTAAACATAGATTTTAGTCTGTGTTTGCGCTCCCCAATTGTTTCCCTCCTTGTACATTTTCTCTTTGTCGTTTCTACCCTTTTTCCTGTTCATTCTTCACAATTTGGTGACCACCACCCTGTTGCAAATCAAACTTTTCGGCCGAAGGAAGAGCTGCGCAAGTTGAACGCCATCAGAAATCGGCTTCAGCTAATCAACAAGCCTCCTGTTAAGACAATTCAGAGTTCTTATGGTGATATAATAGACTGTGTTGCGTCTCATATGCAACATGCTTTTGATCATCCTCAACTGAAAGGACAAAAACCATTGGATCCTCCAGAGAGACCAAGAGGGCATAACCAAATGGATGATGATTTGAGTGATAGCTTTCAGTTATGGAGTTTATCAGGTGAGTCATGTCCTGAAGGAACGATTCCAATTAGAAGAACAACGGAAGAAGACATGTTGAGAGCAAACTCTGTTCGCAGATTTGGAAGGAAAAAAGTAATAAACCGTGTCAGAAGGGACACCAGCGGCAATGGACATGAGCATGCAATTGGGTATGTGACAGGGGATCAGTACTACGGAGCAAAGGCTAGCATTAACGTGTGGGCACCCCTTGTGGAAAACCCATATGAATTCAGCTTGTCTCAAATGTGGGTCATTTCTGGTTCATTTGGGGATGATCTCAACACCATTGAAGCTGGTTGGCAGGCATTTTTATTCAAAAGCACTAATTATAATAATGATGATATTAATAATAATTGTCAATATTTGCAGACTGATGCATATCAAGCAACTGGGTGTTACAATTTACTCTGCTCAGGCTTTGTTCAAACAAACAGTAAAATTGCAATTGGAGCAGCAATCTCTCCAACTTCTTCATATAGTGGAGGACAATTTGATATTAGCTTACTCATTTGGAAGGATCCAAAGCATGGGAATTGGTGGCTTGAATTTGGATCAGGGATCCTAGTTGGGTACTGGCCATCCTTCTTGTTCACCCACTTAGGGGATCATGCAAGCATGATTCAATTTGGTGGAGAAATAGTGAATTCAGGTTCATCAGGGTCTCACACTTCCACCCAAATGGGTAGTGGACATTTTGCTGAAGAGGGTTTTGCAAAAGCTTCATATTTTAGGAACATGCAAGTTGTGGATTGGGACAACAACTTGATTCCCTTGTCAAATTTAAAGGTCCTAGCAGATCACCCGAATTGCTATGACATACAAGGAGGGGTTAATAACGCGTGGGGGAATTATTTTTACTACGGTGGACCTGGCAGAAATGTAAAGTGTCCCTAA 1401 0.4154 MALDVFPWTKSKPRKTQTPSVGRTRQHKCGQTHTWKRSFLNIDFSLCLRSPIVSLLVHFLFVVSTLFPVHSSQFGDHHPVANQTFRPKEELRKLNAIRNRLQLINKPPVKTIQSSYGDIIDCVASHMQHAFDHPQLKGQKPLDPPERPRGHNQMDDDLSDSFQLWSLSGESCPEGTIPIRRTTEEDMLRANSVRRFGRKKVINRVRRDTSGNGHEHAIGYVTGDQYYGAKASINVWAPLVENPYEFSLSQMWVISGSFGDDLNTIEAGWQAFLFKSTNYNNDDINNNCQYLQTDAYQATGCYNLLCSGFVQTNSKIAIGAAISPTSSYSGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLGDHASMIQFGGEIVNSGSSGSHTSTQMGSGHFAEEGFAKASYFRNMQVVDWDNNLIPLSNLKVLADHPNCYDIQGGVNNAWGNYFYYGGPGRNVKCP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01293 466 Pfam Neprosin 245 459 IPR004314 -
Gma18g01293 466 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 45 466 - -
Gma18g01293 466 MobiDBLite consensus disorder prediction 133 155 - -
Gma18g01293 466 MobiDBLite consensus disorder prediction 1 27 - -
Gma18g01293 466 Pfam Neprosin activation peptide 111 220 IPR025521 -
Gma18g01293 466 MobiDBLite consensus disorder prediction 11 27 - -
Gma18g01293 466 MobiDBLite consensus disorder prediction 139 155 - -
Gma18g01293 466 PANTHER - 45 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01293 Gma-Chr18 22590562 22594663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01293 - - gmx:100788950 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01293 18 22590562 22594663 Gma18g01293 18 22590562 22594663 ECH
Gma01g00259 01 2939288 2943601 Gma18g01293 18 22590562 22594663 PCT
Gma18g01293 18 22590562 22594663 Gma01g00259 01 2939288 2943601 PCT