Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00259 ATGTGTTGGATAGATTTGGTGGAATCAAAGCCTAGGAACACACACTTTTGTTTTGTGCATGGAAGAAGAAAAAGAAGAAGAAGAAGACAAGGCCAATGTGAACAAAGTCACACGGATTTGTCAATAGAAACAAAGAGGCAAAATCTCTCAAGCATGGATTTTAGCTTGTGTTTGAGCTCCCCAATCATTTCCACACTTGTACATTTTCTCCTTGTTGCTTCTTTGTTTTGTCCTGTTTGTTCCTCAGATATTGGCAATATTGGCAACACCCCAGTTGCCAATCAGACTTTCAAGCCGCAAGAAGAGGCTCACAAGATGAACATCATAAGAACTCGTCTTCAACAGATCAACAAGCCCGCCGTTAAGACAATTCAGAGTCCTGATGGTGATGTAATAGACTGTGTGGTGTCTCATCAGCAACCAGCTTTTGATCATCCAATGTTGAAGGGACACAAACCACTGGATCCTCCAGAAAGGCCTAAAGGCCATAACCAAATGGACATGAGTGAGAATTTTCAGTTATGGACCATGTCAGGGGAGTCCTGTCCAGAAGGTACAATTCCAATTAGAAGAACAACAGAACAAGATATGTTAAGGGCTAGTTCTGTTAGCAGATTTGGAAGAAAAATAAGAAGACGTGTTAGAAGGGACACCAACAGCAATGGACATGAGCATGCAGTTGGGTATGTGAGTGGAGAGCAGTACTACGGAGCAAAGGCAAGCATAAACGTGTGGGCACCCCGAGTGGCAAATCAAGATGAATTCAGCTTGTCCCAAATGTGGGTCATCTCTGGCTCATTTGGAGATGATCTCAACACCATTGAGTCTGGTTGGCAGGTCAGCCCCGAGCTCTACGGGGACAGATACCCGAGATTCTTTACGTATTGGACGAGTGATGCATATCAAGCAACTGGATGCTACAACTTACTGTGTTCAGGCTTTGTTCAAACTAACAATAGAATTGCAATTGGAGCTGCAATCTCTCCAACTTCTTCCTATGCTGGTGGACAATTTGATATTAGCTTGCTCATCTGGAAGGATCCAAAGCATGGAAATTGGTGGCTTGAATTTGGATCCGGAATCTTAGTCGGGTATTGGCCATCATTCTTGTTCACACACCTAAGGGATCATGCAAGCATGGTGCAATTTGGTGGAGAAATTGTGAATTCAAGGCAATCAGGGTCTCACACTTCGACTCAAATGGGTAGTGGACATTTTGCTAGTGAAGGTTTTGGGAAAGCTTCATATTTTAGGAACATGCAAGTTGTGGATTGGGATAACAACTTGGTACCATTGTCAAATCTTCGGGTTCTAGCGGATCACCCGAATTGCTATGACATACAAGGAGGGATTAATAATGTTTGGGGGAATTACTTTTACTATGGTGGACCTGGAAGAAATGTGAGATGTCCCTAA 1416 0.4315 MCWIDLVESKPRNTHFCFVHGRRKRRRRRQGQCEQSHTDLSIETKRQNLSSMDFSLCLSSPIISTLVHFLLVASLFCPVCSSDIGNIGNTPVANQTFKPQEEAHKMNIIRTRLQQINKPAVKTIQSPDGDVIDCVVSHQQPAFDHPMLKGHKPLDPPERPKGHNQMDMSENFQLWTMSGESCPEGTIPIRRTTEQDMLRASSVSRFGRKIRRRVRRDTNSNGHEHAVGYVSGEQYYGAKASINVWAPRVANQDEFSLSQMWVISGSFGDDLNTIESGWQVSPELYGDRYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYAGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEIVNSRQSGSHTSTQMGSGHFASEGFGKASYFRNMQVVDWDNNLVPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNVRCP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00259 471 PANTHER - 51 471 - -
Gma01g00259 471 Pfam Neprosin activation peptide 123 229 IPR025521 -
Gma01g00259 471 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 51 471 - -
Gma01g00259 471 Pfam Neprosin 252 464 IPR004314 -
Gma01g00259 471 Gene3D - 244 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00259 Gma-Chr1 2939288 2943601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00259 - - gmx:100776639 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00259 01 2939288 2943601 Gma01g00259 01 2939288 2943601 ECH
Gma01g00259 01 2939288 2943601 Gma18g01293 18 22590562 22594663 PCT
Gma18g01293 18 22590562 22594663 Gma01g00259 01 2939288 2943601 PCT