Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00702 ATGAAACCACATAAACTTCCTTCTCCGGCACTCTCACGTGCGTTCGCACGTGCCCTAGGATCCGCCACCACCGCCACGCAATGTGGAGTGGCGTTTCCTTCGAAGACCGTTACCACCGCGAACTTCGAACCGTCGCTGGCGGAGCTCCGGCGCCATGTCCGGACGTCGGACTTCGTGGCCATCGACCTCGAGATGACCGGCGTGACGAGCGCTCCGTGGCGCGAGTTGTTGGAGTTCGACCGCTCCGACGTGCGGTACCTGAAGGTCCGAGACTCCGCCACCAAGTTCGCCGTCGTTCAATTCGGCGTTTGCCCCTTCCGTTGGGATCCCTCCAACCACTCCTTCGTCGCGTATCCGCACAATTTCTATGTTTTTCCTCGACAGCAGCTCGCAGGCTTGGGTCCATGTGATGAATTCCTCTGCCAGACCACATCAATGGATTTCTTGGCTAAATACCAGTTTGATTTTAATGCTTGCATACATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGAAAGCATTAAGGAGTTTGAATTCTACATATGATAGTGAGTGGTCAGACATTGGTAAATTAAAAGATGTTAGGGATATACCATTGCTCAGCGCGGCCGACATTTTGTTCACTGCACGGATGAAAAATAAATTCAGTGAATGGCGTGATGGGTTATTTCAGGAGCAAAATCAAGAAGACCAAATTCAAGGAATTTCAAATGACTCAAAATTTCAAGTGACTTTTTTTGAGATGCATCCAGCTCTTAGGCTTAATAGATTCACATCTCACCAGCTTAAATTGATTCAGTTGCTCATCAGAAAACACTTCAAAGATCTTTCATATGTCAGTGTGAACAGTGAGGCTTCTGGTTCACAACAATTAGTCGTATATACAGACTTAAAGGATGAATTAAACTTACTTCTGAAGAAGGTGAAAGAAGAAAATCACAGAGCAGAAGAGATGAAGATCCAAGCTGCCGTTGGATTCCGCCATGTTATTGATCTCCTTTCATCAGAACAGAAGTTGATAGTTGGATACAATTGTTTTTTAGATATTGCACATGTCTACAGCAAATTTATAGGCCCTCTTCCGGGGACTCCTGAAGAGTTTGTTGCCTCTGTTAGCAAGTGCTTTCCTCACATTGTTGACACCAAGATACTCCTGAGCACTAATTTGATGTTCCAAGAAAAGATGAAAAGGTCCAGAAAATCACTGGCCTCTGCATTCACTTCATTTTGTCCACAAATTGCAGCTGGCTCCAGAAGCACAGATCTAGGTTCACTCTCTCATGTGAAAGTGAACGTTGAGGTTGATGATTCAAGATCATGCAGCTGGAGCCCTGGAGGCAAGCATGAGGCAGGATATGATGCCTTCATGACTGGATGCATCTTTGCCCAGTTATGCAGTGATTTAGGTATCGATTTTAAACTCCATGATTCTTCAAAACCATTAGCCCTCAATGAGAAACTGCAGAAGTACGTTAATCGTCTATATCTTAGTTGGATGCACAGGGACATTATTGATCTAAATACTGGTAATAAGGTTGCAGATTCTTCACTCAGGAGCCTGACGAAGCGGTACCCAAAAATTATGTTTGAGAACATTGTTATTATTTGGGGATTTTCTTCTAAGCTGAAGGCAAACGAAATAAGAGAGTGCATATCTAAAGTATTTGGACCAACTTCTGTAGTTTCTGTCTTCCACTTGGATGCAACTGCAGCATTCGTCCAGTTTAGCAAAACTGAGTTAGTTTCTGATTTTCTTTTAGTGAAGGATTCCTTGGAGAGAAGTGGTGGTGCAATCTCGGTTTTGCATCCACTGTCAAAACTTTTGGAAGGTGGAAATACATGTGGTGCCAATTATGATACTTACAGAGAAATATGTGGTTCATCCTTATCAGAAGGTCTGTTCGCTGATCAGGCAGAGGCAGTTGGTATAAAGTGGAAGACCAAATTAACAGAATACAAGGTAGCATCGAGAGGCAAAGAACATGAAAATCCTAGTGTACAAGATAATGTAAATACGGTTATGAAGAATGTAGAAAGGACCAAGCCAAACACAATTGATCAGTTAGGAAATGCTCCATCTTGTGGGCAAGTCTCAACTTTTGAGATTGAAGATTCTTATGTTGCAGAAGCCAATTTGTGA 2145 0.4322 MKPHKLPSPALSRAFARALGSATTATQCGVAFPSKTVTTANFEPSLAELRRHVRTSDFVAIDLEMTGVTSAPWRELLEFDRSDVRYLKVRDSATKFAVVQFGVCPFRWDPSNHSFVAYPHNFYVFPRQQLAGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQERKALRSLNSTYDSEWSDIGKLKDVRDIPLLSAADILFTARMKNKFSEWRDGLFQEQNQEDQIQGISNDSKFQVTFFEMHPALRLNRFTSHQLKLIQLLIRKHFKDLSYVSVNSEASGSQQLVVYTDLKDELNLLLKKVKEENHRAEEMKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGTPEEFVASVSKCFPHIVDTKILLSTNLMFQEKMKRSRKSLASAFTSFCPQIAAGSRSTDLGSLSHVKVNVEVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLHDSSKPLALNEKLQKYVNRLYLSWMHRDIIDLNTGNKVADSSLRSLTKRYPKIMFENIVIIWGFSSKLKANEIRECISKVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSGGAISVLHPLSKLLEGGNTCGANYDTYREICGSSLSEGLFADQAEAVGIKWKTKLTEYKVASRGKEHENPSVQDNVNTVMKNVERTKPNTIDQLGNAPSCGQVSTFEIEDSYVAEANL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00702 714 Coils Coil 296 323 - -
Gma18g00702 714 Pfam CAF1 family ribonuclease 37 463 IPR006941 -
Gma18g00702 714 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 33 651 - -
Gma18g00702 714 SUPERFAMILY Ribonuclease H-like 36 474 IPR012337 -
Gma18g00702 714 Gene3D - 36 199 IPR036397 GO:0003676
Gma18g00702 714 Gene3D - 291 512 IPR036397 GO:0003676
Gma18g00702 714 PANTHER POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1 33 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00702 Gma-Chr18 7246569 7252791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00702 K01148 - gmx:100808217 1415.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00702 18 7246569 7252791 Gma18g00702 18 7246569 7252791 ECH
Gma18g00702 18 7246569 7252791 Gma08g03165 08 48442920 48447822 GST