Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03165 ATGGCTTGGGTGTTTGAGTTGCGGAGTCGTTCCCTCTGCACGTCCTCCTCCTCGAAATGGAGGGTGAAGCAGGTGACAACCTCCAACTTCCAAGAGTCCCTGCAAGAGATAAAGACGCACATCTCCAACTCCGACTTTGTCGCCATTTCCATGGGAAAAACGGGCTCTCCCTCCGCGCCGTCGTGGCTCCGCCCTCTACCCTTCGACACCGCCCAGACTGCCTACTCCAAGGCCCGCCGCGCCGCCCAGAGATTCCAGCTCCTCCACTTCGCCGTCTGCCCCTTCTCCGTCTCCCGCTCCGACAAACTCCTCGCTCACCCGTATAATTTCATGTTGTTTCCAAGAGATGAAATGAAGATGGGGATGCCCACTTACAGCTTTTCGTGCCAGACTTCGCTACTTGCCTCCATGGCTCGCCAGGGGTTTGATTTCAATGCTTGCGTCTACAATGGCATATCATATCTATCCAGAGCACAAGAGTCAGCAGCTAGAATTCGTCTTGGGACTGCTCTCCCTTCTCTTCGTGTGATGAAATCTTCTTCACCCTCTACTGTTGCTGATACAGTGTTTGTTGAGAGGATTAGATCAAAGGTTAAATATTGGAGAGAGTCATGTAAAAGCTCCGACACAAACAAAAGCAGAGATGAAGAACTTGTCAACTCCCTTAGGAATATTGTCCTGGGCAATGAACAGTTCAGATCAAGACCTTGCATGACTGTAGATGTTTGCAGTGAACGTCAAGTGCAACTTATTCTGGAGATGGTGTTAGACTACTCAGATGATCTTCTTCCTTTGCCAATCCCTACTAAGAGTGGGACCATTCATGCAGTACGAATTGTTTTGGCAAATTCTAAAGAAGATAAGGATTTATTGGAGAGAGAGCTTCGAAATCTTGAAGAGGAGGAAAGCAAGAAAATTCGTGGATTCCGAGAGGTGATCGATTTGATTTCTGCTTCACAGAAACCTGTTATCTCCCACAATTGCCTTAATGATTGTACACTAATTCATTCAAAATTCATTGCTCCACTTCCGCCTGAGATAGATGAATTTGTGAGCTCCTTGTGCTCGGTTTTCCCTGAGGTGCTTGACATAAATTATTTGATGAAGAAACATGGAACCATGAGAAAAGTGACCAACATTCCGAGTGCTATATCCTACTTGAATAATCATTTTTTTGCACCAGTTGATTTGGAAATTCCTGACCAAGCTACAGTAAAAGAAGGCAAGATTCACGGACTTACTGCATTAAGGCTATCCTATTTATTTATGAAGCTTTGCTCTATATTGAAAATTTCCCCAAATGTTACTGAATCTGGCAACAAGCATTTGGCCCCCGAGCTTGAAGACTTCACCAATGTATTCCATCCATTCTCAACCCCTATCCAAGATTCATTTAATGGTGGGGATGTCGGCATGTGGACCAATAATACAAAAAAAGTCAGTTGTGAGCATTTGGTTTTCTTATGGGGATTCAAAATTGGTATCACAGCTGGCATGCTGAAGAGTTTACTTCGTTCTTCCCATGATATCTTTTCACGAGAGTTTGATGTTAAATTGGTGGACAAGAGTTGTGCCATTGTTGTTTTCTGGCAATCTGGGGTATCAAAAAGATTTCTAGACATATTGAATAGTGAAGAAATAAGAGGAGACTTAAAGGAGTTAGTGTCAGATGGCATGAGGGTAACCAGTTATGAGACCTACAACACAATATGTAGGTTAGGTTTGTGGGAGATGGATCTTGCAGAATCATTAGAAAGAGCCTTGGAAAGTTCTTGCTGTGATATTGAGAGTAATTGTGAGAGAAAATCTTCTGAGATTCATTGGTATAATGACAATGTAATTAACTTGGATGATCTTTAA 1860 0.4339 MAWVFELRSRSLCTSSSSKWRVKQVTTSNFQESLQEIKTHISNSDFVAISMGKTGSPSAPSWLRPLPFDTAQTAYSKARRAAQRFQLLHFAVCPFSVSRSDKLLAHPYNFMLFPRDEMKMGMPTYSFSCQTSLLASMARQGFDFNACVYNGISYLSRAQESAARIRLGTALPSLRVMKSSSPSTVADTVFVERIRSKVKYWRESCKSSDTNKSRDEELVNSLRNIVLGNEQFRSRPCMTVDVCSERQVQLILEMVLDYSDDLLPLPIPTKSGTIHAVRIVLANSKEDKDLLERELRNLEEEESKKIRGFREVIDLISASQKPVISHNCLNDCTLIHSKFIAPLPPEIDEFVSSLCSVFPEVLDINYLMKKHGTMRKVTNIPSAISYLNNHFFAPVDLEIPDQATVKEGKIHGLTALRLSYLFMKLCSILKISPNVTESGNKHLAPELEDFTNVFHPFSTPIQDSFNGGDVGMWTNNTKKVSCEHLVFLWGFKIGITAGMLKSLLRSSHDIFSREFDVKLVDKSCAIVVFWQSGVSKRFLDILNSEEIRGDLKELVSDGMRVTSYETYNTICRLGLWEMDLAESLERALESSCCDIESNCERKSSEIHWYNDNVINLDDL 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03165 619 PANTHER POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE 13 611 - -
Gma08g03165 619 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 13 611 - -
Gma08g03165 619 SUPERFAMILY Ribonuclease H-like 15 429 IPR012337 -
Gma08g03165 619 Coils Coil 281 308 - -
Gma08g03165 619 Gene3D - 275 463 IPR036397 GO:0003676
Gma08g03165 619 Gene3D - 24 218 IPR036397 GO:0003676
Gma08g03165 619 Pfam CAF1 family ribonuclease 25 391 IPR006941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03165 Gma-Chr8 48442920 48447822 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03165 K01148 - gmx:100803008 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00702 18 7246569 7252791 Gma08g03165 08 48442920 48447822 GST