Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00694 ATGGCTCCCGCAAGGAAGAAACCTTCTAAGCCAAGCAAATCTCCTAAGAACCCTAAGAAGATCCAACCCAAGCACGATTCCAGCTCCGAATCCGAAGAAGACACGCCGCCGCAGCAACTGCAACCGGAGCAACTCGAACTAGGCGACAACTCCGATTCCGCGTCGGAGCTCTCTTCTGTCAGTGACGATCCTTTAGCCGACGATTTCCTCCAAGGAAGCGATGACGACGAAGgttcggagtcaggtttggagtcaggttcggaTTCCGATTCGGATGACGATGACATTGAAAAGAAGTCGAGAGCTATTGATGAAGAGAAGGCGAGAGAGGAAGAGGATGCGGATGCCGAAATGCAGCTCAACATCAACCAAGAGTCTGATGAGTTCAGATTGCCTACCAAAGAGGAGCTTGAGGATGAGGCTCTCCGCCCACCTGATCTTTCCAATCTCCAGAGGAGAATCAAAGAGATTGTTCGTGTTCTTTCAAATTTTAAGGCTTTGAGGCAAGATGGGTCAACAAGAAAGGAGTATGTTGAACAGCTTAAGAAAGATTTATGTACGTACTATGGCTACAATGAGTTTCTAATTGGTGCTCTAGTGGAGATGTTTCCAGTTGTTGAACTCATGGAACTGATTGAAGCCTTTGAAAAGCCACGCCCTATGTGTCTAAGGACTAATACATTGAAGACACGCAGACGGGATTTGGCGGATGTTTTGATAAATAGGGGAGTAAATTTGGATCCTTTAAGCAAGTGGTCAAAGGTTGGACTTGTTGTGTATGATTCTCAAGTGCCTATTGGTGCCACTCCGGAGTATATGGCTGGTTTCTACATGCTGCAAAGTGCAAGCTCTTTTCTGCCTGTTATGGCTTTGGCTCCTCAAGAGAAGGAACGTGTCATTGATATGGCAGCTGCACCTGGTGGTAAAACAACTTACATTGCTGCTCTAATGAAGAATACTGGAATAATATTTGCAAATGAAATGAAGGTACCAAGGCTCAAGTCATTGACTGGAAATTTGCATCGCATGGGTGTATCTAATACTGTAGTGTGTAACTATGATGGAAAGGAGCTTCCAAAGGTTTTAGGTGTCAATGTTGTTGATAGAGTATTATTGGATGCTCCTTGCAGTGGAACTGGGGTTATATCCAAAGATGAGTCAGTTAAAACCTCTAAAAGTCTGGAAGATATACAGAAATGTGCGCATCTACAAAAGGAGCTCATTCTTGCAGCAATTGACATGGTGGATGCTAATTCAAAATCTGGGGGATATATTGTTTATTCTACATGCTCAATTATGGTTGCCGAGAATGAAGCAGTTATTGACTATGCACTCAAAAAGCGGGATGTTAAACTGGTTCCTTGTGGACTTGATTTTGGGCGTCCAGGATTTACAAGGTTTAGGGAACAACGTTTTCACCCATCTTTAGAAAAGACAAGGCGTTTCTATCCTCACGTACAGAATATGGATGGTTTTTTTGTGGCAAAGTTGAAAAAAATGAGCAGCTCAAAACCTGGGGCAAAATCATCAGAGACAGCCGAGAAGGAAGAAGACACTACCACGTTCGTGGAGGAAAAGGAGAAATCAAGTTATGGCATAAAAGAAAATGGCAATGTATCTTCTGAATCCGAATCCAAAAACGGGAAGAAAAGAAAATTCCCCTCGAAACCAAGTAATGGTCTAAAAGAAAAGGGCAAAGAATCTTCTGAATCTGAACCCAAAAAGAGGAATAAAAGGCTATTTCCATCTAAGGAAGAGATTTCAAAAGCCAGGGAGGAGAAAAGAAATGCTTTAAGAGAAAAAAACAGAAAAGGTAGCAAACGACAGAAGAAAAAATGA 1839 0.4182 MAPARKKPSKPSKSPKNPKKIQPKHDSSSESEEDTPPQQLQPEQLELGDNSDSASELSSVSDDPLADDFLQGSDDDEGSESGLESGSDSDSDDDDIEKKSRAIDEEKAREEEDADAEMQLNINQESDEFRLPTKEELEDEALRPPDLSNLQRRIKEIVRVLSNFKALRQDGSTRKEYVEQLKKDLCTYYGYNEFLIGALVEMFPVVELMELIEAFEKPRPMCLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTGNLHRMGVSNTVVCNYDGKELPKVLGVNVVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCAHLQKELILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDFGRPGFTRFREQRFHPSLEKTRRFYPHVQNMDGFFVAKLKKMSSSKPGAKSSETAEKEEDTTTFVEEKEKSSYGIKENGNVSSESESKNGKKRKFPSKPSNGLKEKGKESSESEPKKRNKRLFPSKEEISKAREEKRNALREKNRKGSKRQKKK 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00694 612 MobiDBLite consensus disorder prediction 1 131 - -
Gma18g00694 612 Coils Coil 584 604 - -
Gma18g00694 612 TIGRFAM nop2p: NOL1/NOP2/sun family putative RNA methylase 223 499 IPR011023 GO:0003723|GO:0006396|GO:0008757
Gma18g00694 612 MobiDBLite consensus disorder prediction 509 532 - -
Gma18g00694 612 ProSitePatterns NOL1/NOP2/sun family signature. 367 378 IPR018314 GO:0003723|GO:0008168
Gma18g00694 612 MobiDBLite consensus disorder prediction 502 612 - -
Gma18g00694 612 Gene3D Sun protein; domain 3 177 284 - -
Gma18g00694 612 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 183 499 IPR029063 -
Gma18g00694 612 MobiDBLite consensus disorder prediction 33 60 - -
Gma18g00694 612 MobiDBLite consensus disorder prediction 1 18 - -
Gma18g00694 612 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 16 580 IPR023267 GO:0001510
Gma18g00694 612 MobiDBLite consensus disorder prediction 92 116 - -
Gma18g00694 612 Gene3D Vaccinia Virus protein VP39 287 603 IPR029063 -
Gma18g00694 612 PRINTS RNA (C5-cytosine) methyltransferase signature 271 285 IPR023267 GO:0001510
Gma18g00694 612 PRINTS RNA (C5-cytosine) methyltransferase signature 482 499 IPR023267 GO:0001510
Gma18g00694 612 PRINTS RNA (C5-cytosine) methyltransferase signature 368 380 IPR023267 GO:0001510
Gma18g00694 612 PRINTS RNA (C5-cytosine) methyltransferase signature 300 310 IPR023267 GO:0001510
Gma18g00694 612 PRINTS RNA (C5-cytosine) methyltransferase signature 422 438 IPR023267 GO:0001510
Gma18g00694 612 Pfam 16S rRNA methyltransferase RsmB/F 288 498 IPR001678 GO:0008168
Gma18g00694 612 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 174 194 IPR023273 GO:0008168
Gma18g00694 612 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 207 219 IPR023273 GO:0008168
Gma18g00694 612 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 230 243 IPR023273 GO:0008168
Gma18g00694 612 PANTHER BNACNNG49010D PROTEIN 16 580 - -
Gma18g00694 612 Pfam N-terminal domain of 16S rRNA methyltransferase RsmF 207 284 IPR031341 -
Gma18g00694 612 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 211 500 IPR001678 GO:0008168
Gma18g00694 612 MobiDBLite consensus disorder prediction 68 91 - -
Gma18g00694 612 MobiDBLite consensus disorder prediction 544 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00694 Gma-Chr18 7134504 7140566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00694 K14835 - gmx:100807160 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00694 18 7134504 7140566 Gma18g00694 18 7134504 7140566 ECH
Gma18g00694 18 7134504 7140566 Gma08g03082 08 47521897 47528579 GST