Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00668 ATGGATGGGAAAAAATCTCTACAAATAACTAGAAGTGGTACTGGTGCTTATGATGATGATGGACATGCCAAAAGGACTGGGAATTTGCAGAGTGCTGTAGCTCATATCATTACTGCTGTTATTGGTTCTGGTGTTCTCTCTCTTGCATGGAGCACTTCTCAGTTAGGATGGATTGGAGGGCCAGTTGCATTGCTTTGTTGTGCAATTGTTACCTATATTTCTTCATTCCTCCTGTCTGATTGCTACAGAACTCCTGATCCTGTCACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAGTTTATCTTGGTTATAAAAGGACATGTGTAGCTGGCTTCCTTCAATTTTTGACTTTGTATGGTACTAGTATTGCTTATGTACTAACCACAGCAACTAGTCTGAGTGCAATTCTGAGATCAAATTGTTATCACAAGAAAGGGCATGAAGCTCCTTGTAAATATGGTGGCAATCTGTATATGGCACTGTTTGGACTTGTTCAGATTGTAATGTCATTCATACCGGATCTCCATAACATGGCATGGGTTTCAGTTGTTGCAGCACTTATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATAGCAACGGTCATAAAAAATGGAAGAATTATGGGAAGCTTGACAGGAATACCAACTGATAAAATTGCTGACAAATTTTGGTTAGTCTTCCAAGCACTTGGTGACATTGCCTTTGCCTATCCATACTCCATTCTCCTTCTTGAGATCCAGGACACTCTAGAGTCTCCTCCACCAGAAAATCAAACCATGAAAAAGGCCTCCATGGTTGCAATCTTCATTACAACATTCTTCTACCTGTGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATGATACACCAGGAAACCTCTTGACAGGGTTTGGCTTTTTTGAGCCTTTCTGGCTCATTGACCTTGCTAATGCTTGCATCATTCTTCACTTGGTGGGAGGATATCAGATTTACAGTCAACCAATATACAGTACTGTTGATAGATGGGCTTCAAGAAAATTCCCCAACAGTGGCTTTGTGAATAATTTCTACAAAGTGAAACTGCCTTTGCTTCCAGGTTTTCAGCTAAATCTTTTCAGGTTCTGTTTTAGAACAACCTATGTGATCTCAACCACTGGTCTTGCAATCTTTTTTCCTTACTTCAACCAAATCCTAGGAGTGTTAGGAGCCATAAACTTCTGGCCATTGGCTATATACTTCCCAGTAGAGATGTACTTTGTACAGAACAAAATTGCAGCTTGGAGTAGCAAATGGATTGTTCTTAGAACATTCAGCTTTGCTTGCTTTCTTGTCACTGGAATGGGCTTGGTTGGCTCACTTGAAGGAATAACGCTGCGAATCACGTTTTGTTCGAGCTTCCTCCATTCTCAATTTTCAGAATCGATTTCGAAGAGCTGCTTCGTCTTTGCTCCACCAAAATTCTTCACCGTTGTAGTTGCATGGGTCACACTTGGCAGAGCACAACTTAATTTTGGTGAGCCTGATAATGCTATTGAAAGCTTTGACCGTGCTTTAGCTCTCAAGgtgttcattcagttatttatttga 1584 0.4034 MDGKKSLQITRSGTGAYDDDGHAKRTGNLQSAVAHIITAVIGSGVLSLAWSTSQLGWIGGPVALLCCAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVRVYLGYKRTCVAGFLQFLTLYGTSIAYVLTTATSLSAILRSNCYHKKGHEAPCKYGGNLYMALFGLVQIVMSFIPDLHNMAWVSVVAALMSFTYSFIGLGLGIATVIKNGRIMGSLTGIPTDKIADKFWLVFQALGDIAFAYPYSILLLEIQDTLESPPPENQTMKKASMVAIFITTFFYLCCGCFGYAAFGNDTPGNLLTGFGFFEPFWLIDLANACIILHLVGGYQIYSQPIYSTVDRWASRKFPNSGFVNNFYKVKLPLLPGFQLNLFRFCFRTTYVISTTGLAIFFPYFNQILGVLGAINFWPLAIYFPVEMYFVQNKIAAWSSKWIVLRTFSFACFLVTGMGLVGSLEGITLRITFCSSFLHSQFSESISKSCFVFAPPKFFTVVVAWVTLGRAQLNFGEPDNAIESFDRALALKVFIQLFI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00668 527 ProSiteProfiles TPR repeat profile. 490 523 IPR019734 GO:0005515
Gma18g00668 527 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 4 455 - -
Gma18g00668 527 MobiDBLite consensus disorder prediction 1 21 - -
Gma18g00668 527 Pfam Transmembrane amino acid transporter protein 26 453 IPR013057 -
Gma18g00668 527 PANTHER OS05G0424000 PROTEIN-RELATED 4 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00668 Gma-Chr18 6783839 6793788 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00668 6 443 Organic Solute Cotransporters AT1G77380 53.515 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00668 K24917 - gmx:100818535 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00668 18 6783839 6793788 Gma18g00668 18 6783839 6793788 ECH
Gma14g00099 14 820149 822823 Gma18g00668 18 6783839 6793788 PCT
Gma02g02839 02 53868533 53875921 Gma18g00668 18 6783839 6793788 PCT