Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02839 ATGGGTGAGGAGGAAATAGATGATTCTCCCTTGATTCAAGGTTTTCCTTCCGGCGACGTGCCATTTAGGAGAACTGGTAATGTAGAGAGGGCAGTAGCACATATAATAACTGGTGTGATAGGGGCAGGGGTGCTGTCTCTAGCATGGTCTGTGGCACAGTTAGGGTGGATTGCTGGTCCTTTTATCATCATAGTCTTTGCAGGAACAACCTTTCTTTCAGCAAACCTTCTTTCTGACTGCTACAGATTCCCTCATCCTCTCTATGGCAACATTAGGTGCCCCTCCTACATTGATGCTGTCAAGGTTTACCTAGGAGACTCAAGGCAAAAGGTGTGTGGAGTGCTGGTGCATGCGAGCTTATATGGTGCCACCACGGCCTATGTCATTACATCTGCCACCAGCATCAGAGCAATACTGAAATCAAATTGTTATCACAAGGAAGGGCATCAGGCTCCTTGTAAATATGGGGATGCAGTATATATGATGCTGTTTGGACTAGTTCAGATCATAATGTCATTCATACCAGATCTCCACAACATGGCATGGGTTTCAATTGTTGCGGCCATAATGTCCTTTACATACTCATCTATTGGACTTGGACTTGGCATCACAACAGTAATAGAAAATGGAAGAATTATGGGTAGTTTAACAGGAGTACCGGCTTCAAATATTGCTGACAAGTTATGGTTAGTCTTCCAAGGAATTGGTGATATTGCCTTTGCCTATCCATACACAGTCATCCTCCTTGAGATACAGGACACTCTAGAGTCTCCTCCACCAGAAAACAAGACCATGAAAAAGGCCTCCATGATTGCTATCCTCATTACAACATTCTTCTACCTCTGCTGTGGATGCTTTGGATATGCGGCTTTTGGAAATCAAACACCAGGAAACCTCTTGACAGGGTTTGGATTTTACGAGCCTTACTGGCTCATTGACTTTGCCAATGCTTGCATTGTTCTTCACTTGGTAGGAGGATATCAGATTTACAGTCAGCCGATATATGGTGCTGTTGACAGATGGTGTTCAAAAAGATACCCCAACAGTGGATTTGTGAATAATTTCTACCAATTGAAACTGCCTCGGTTGCCAGCTTTTCAGCTAAACATGTTCAGGATATGTTTTAGAACAGCTTATGTGGTTTCCACGACTGGACTTGCGATCCTATTTCCTTACTTCAATCAAGTTATAGGAGTGTTAGGAGCCTTAGGCTTTTGGCCATTGGCTATATATTTCCCGGTAGAGATGTACTTTGTGCAGAGGAAAGTTGAAGCTTGGTCTAGAAAATGGATTGTCCTCAGGACCTTCAGCTTTATTTGCTTTCTGGTGTCATTACTGGGTCTCATTGGATCACTTGAAGGAATCATAAGCGAGAAACTAAGCTAA 1386 0.4322 MGEEEIDDSPLIQGFPSGDVPFRRTGNVERAVAHIITGVIGAGVLSLAWSVAQLGWIAGPFIIIVFAGTTFLSANLLSDCYRFPHPLYGNIRCPSYIDAVKVYLGDSRQKVCGVLVHASLYGATTAYVITSATSIRAILKSNCYHKEGHQAPCKYGDAVYMMLFGLVQIIMSFIPDLHNMAWVSIVAAIMSFTYSSIGLGLGITTVIENGRIMGSLTGVPASNIADKLWLVFQGIGDIAFAYPYTVILLEIQDTLESPPPENKTMKKASMIAILITTFFYLCCGCFGYAAFGNQTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIYSQPIYGAVDRWCSKRYPNSGFVNNFYQLKLPRLPAFQLNMFRICFRTAYVVSTTGLAILFPYFNQVIGVLGALGFWPLAIYFPVEMYFVQRKVEAWSRKWIVLRTFSFICFLVSLLGLIGSLEGIISEKLS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02839 461 Pfam Transmembrane amino acid transporter protein 25 456 IPR013057 -
Gma02g02839 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 6 460 - -
Gma02g02839 461 PANTHER OS05G0424000 PROTEIN-RELATED 6 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02839 Gma-Chr2 53868533 53875921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02839 19 456 Organic Solute Cotransporters AT5G09220 50.340 1.76e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02839 K24917 - gmx:100786621 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02839 02 53868533 53875921 Gma02g02839 02 53868533 53875921 ECH
Gma14g00099 14 820149 822823 Gma02g02839 02 53868533 53875921 GST
Gma18g00666 18 6769968 6773881 Gma02g02839 02 53868533 53875921 PCT
Gma08g03124 08 47940096 47944760 Gma02g02839 02 53868533 53875921 PCT
Gma02g02839 02 53868533 53875921 Gma18g00668 18 6783839 6793788 PCT