Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00408 ATGAGATTCCTCCCTCTGTTGCAGCATGAAATCGTACCCACCGAACTCATCGACCGAATTGCGCGTCTCAAGCATGGAGGCACGTACAAGGTTTTGAAAAACTTGCTCAAACACAAGTTGTTGCATCACGACTCTTCTAAATATGATGGGTTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGACTATGGTGAACAAAGGAGTGTTTGTAGCAGTTGGACGCCAGATTGGTGTTGGAAAGGAATCTGATATATTTGAGGTTGCCCGTGAAGACGGAACAGTTCTGGCTATGAAGTTGCATAGGCTTGGAAGAGTCTCTTTCCGAGCCGTCAAATCTAAGCGTGACTACTTGAGACATCGCAGTAGTTATAATTGGCTCTATTTGTCTCGCCTCGCTGCACTTAAAGAATTTGCTTTCATGAAGGCTTTGGAAACACATGGCTTCCCTGTTCCAAATGCAATAGAAAGCAATAGACATTGTGTAGTCATGTCACTCGTCCAAGGTTATCCTCTTGTTCAGGTTAAGCAGTTACTGAATCCAGAGACAGTTTTTGAGGCAATTCTTGGTCAGGTCGTTCGGTTGGCAGAGCATGGTCTCATTCATTGTGATTTCAATGAATTTAACATCATGATTAATGATGATGAAAAAATTACAATGATTGATTTTCCACAAATGGTATCTGTGTCACACCGTAATGCACAGATGTACTTTGACCGTGATGTTGAATGCATCTTTAAGTTTTTCAGGAAAAGGTTCAATCTTTCTTTTCAAGAAAGCATAGATGATATTGATGGTTCTGATGAAGGGAGAGATGAAGCTGGAAAGCCAAGTTTTTCTTCAATAGAAAGAAGTGCTGGTTTTCTAGATAGGGAGCTTGCTGCCAGTGGCTTTACTAGAAAGAATGAAGAAGATATTCAGAGGTTCATTGAAGGTGGGGCAGAAAGTGATACAAATTCAGATAGTGAAGGGGTTGACTTGGTGGAAGACCTGAATGAAGCAGACACTGTAGATGATGATTCTTCACATTTGTCAGAACAGAATGAGGGATCCGAAAGTCAAGGGAAAGAGGAGATTTGTGAAGCACGTGAAAGCAGTGGATCTGAAAAGGAAGATGCAAGTGACAATGGGGAAAGCAATGAAGATACATTGCAAAATGAAGCTGAACTCGTTAAGAACTTGAGTAAGCAACGACGACATGCCATAGCGAAAGCTCATAAGGGACGAAAGACTGTTGCAGCCAGAAATTCCTACAAAGACAAAGGTGGTAGATCATCTCACAATTCTAAAATCCAGAAACAGTTGAGCAGCTGGTGA 1323 0.4157 MRFLPLLQHEIVPTELIDRIARLKHGGTYKVLKNLLKHKLLHHDSSKYDGFRLTYLGYDFLAIKTMVNKGVFVAVGRQIGVGKESDIFEVAREDGTVLAMKLHRLGRVSFRAVKSKRDYLRHRSSYNWLYLSRLAALKEFAFMKALETHGFPVPNAIESNRHCVVMSLVQGYPLVQVKQLLNPETVFEAILGQVVRLAEHGLIHCDFNEFNIMINDDEKITMIDFPQMVSVSHRNAQMYFDRDVECIFKFFRKRFNLSFQESIDDIDGSDEGRDEAGKPSFSSIERSAGFLDRELAASGFTRKNEEDIQRFIEGGAESDTNSDSEGVDLVEDLNEADTVDDDSSHLSEQNEGSESQGKEEICEARESSGSEKEDASDNGESNEDTLQNEAELVKNLSKQRRHAIAKAHKGRKTVAARNSYKDKGGRSSHNSKIQKQLSSW 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00408 440 MobiDBLite consensus disorder prediction 339 376 - -
Gma18g00408 440 CDD RIO2_C 74 254 IPR030484 GO:0004672
Gma18g00408 440 Pfam RIO1 family 86 260 - -
Gma18g00408 440 MobiDBLite consensus disorder prediction 415 429 - -
Gma18g00408 440 MobiDBLite consensus disorder prediction 399 414 - -
Gma18g00408 440 PANTHER SER/THR-PROTEIN KINASE RIO2 7 440 - -
Gma18g00408 440 SUPERFAMILY "Winged helix" DNA-binding domain 6 70 IPR036390 -
Gma18g00408 440 Gene3D Transferase(Phosphotransferase) domain 1 172 319 - -
Gma18g00408 440 SUPERFAMILY Protein kinase-like (PK-like) 75 251 IPR011009 -
Gma18g00408 440 SMART rio_2 44 268 IPR000687 GO:0004674|GO:0005524
Gma18g00408 440 Gene3D Phosphorylase Kinase; domain 1 73 170 - -
Gma18g00408 440 PANTHER BNAA01G19540D PROTEIN 7 440 - -
Gma18g00408 440 MobiDBLite consensus disorder prediction 337 440 - -
Gma18g00408 440 Gene3D - 5 71 IPR036388 -
Gma18g00408 440 Pfam Rio2, N-terminal 8 69 IPR015285 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00408 Gma-Chr18 3715728 3724247 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00408 K07179 - gmx:100789490 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00408 18 3715728 3724247 Gma11g02162 11 36666582 36673365 GST