LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g02162	ATGAAGCTTGACGTAGATGTCTTGAGATATCTCTCCAAAGATGATTTTAGGGTTCTCACTGCTGTTGAATTGGGCATGCGGAATCATGAAATCGTACCCACTGAACTCATAGACCGAATTGCGCGTCTCAAGCATGGAGGCACGTACAAGGTTTTGAAAAACTTGCTCAAGCATAAGTTGTTGCACCACGACTCCTCTAAATATGATGGATTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGACTATGGTGAACAAAGGAGTGTTTGTGGCTGTTGGACGTCAGATTGGCGTTGGAAAGGAATCTGATATATTTGAGGTTGCCCGTGAAGACGGAACAGTTCTAGCTATGAAGTTGCATAGGCTTGGTAGAGTCTCTTTTAGAGCTGTCAAATCTAAGCGTGACTACTTGAGACATCGCAGTAGTTATAACTGGCTCTATTTGTCTCGCCTTGCTGCGCTTAAAGAATTTGCTTTCATGAAGGCTTTGGAAACACATGGATTCCCTGTTCCAAATGCAATAGAAAACAATAGACATTGTGTAGTCATGTCACTCGTCCAGGGTTACCCTCTTGTTCAGGTTAAGCAGTTACAGAATCCAGAGACAGTTTTTGAGGCAATTCTTGGTCAGGTTGTTCGGTTGGCAGAACATGGTCTCATTCATTGTGATTTCAATGAATTTAACATCATGATTGATGATGATGAAAAAATTACAATGATTGATTTTCCACAAATGGTATCTGTGTCACACCGTAATGCGCAGATGTACTTTGACCGTGATGTTGAATGCATCTTTAAGTTTTTCAGGAAAAGGTTCAATCTTTCTTTTCAAGAAAGCATAGATGATAATGATGATTCTGATGAAGGGAGAGATGAAGCTGGAAAACCCTGTTTTTCTTCAATAGAAAGAAGTGCTGGTTTTCTAGATAGGGAACTTGCTGCCAGTGGCTTTACTAGAAAGAATGAAGAAGATATTCAAAGGTTCATTGAAGGCGGGGCAGAAAGTGATACAAATTCAGATAGTGAAGGGGTTGACTTagtggaagacctgaatgaagcagacactgtagatggtgattcttcacatttgtcagtggaagagctgaatgaagcagacactgtagatgatgattcttcacatttgtTAGAACAGAATGAGGGATACAAATGTCAAGGGAAAGAGGAGAGTTGTGAAGCACGTGAAAGCAGTGGATCTGAAAAGGAAGTTGTAAGTGACAATGAGGAAAACAATGAAGAAGCATTGCAAAGTGAAGCTGAACTCGTTAAGAACTTGAGTAAGCAAAGACGATGCGCCATAGCGAAAGCTCATAAGGGACGGAAGACTGTTGCTGCCAGAAATTCCTACAAAGACAAAGGTGGTAGGTCATCTCACAATTCTAAAATCCAGAAACAGTTGAGCAGCTGGTGA	1437	0.3793	MKLDVDVLRYLSKDDFRVLTAVELGMRNHEIVPTELIDRIARLKHGGTYKVLKNLLKHKLLHHDSSKYDGFRLTYLGYDFLAIKTMVNKGVFVAVGRQIGVGKESDIFEVAREDGTVLAMKLHRLGRVSFRAVKSKRDYLRHRSSYNWLYLSRLAALKEFAFMKALETHGFPVPNAIENNRHCVVMSLVQGYPLVQVKQLQNPETVFEAILGQVVRLAEHGLIHCDFNEFNIMIDDDEKITMIDFPQMVSVSHRNAQMYFDRDVECIFKFFRKRFNLSFQESIDDNDDSDEGRDEAGKPCFSSIERSAGFLDRELAASGFTRKNEEDIQRFIEGGAESDTNSDSEGVDLVEDLNEADTVDGDSSHLSVEELNEADTVDDDSSHLLEQNEGYKCQGKEESCEARESSGSEKEVVSDNEENNEEALQSEAELVKNLSKQRRCAIAKAHKGRKTVAARNSYKDKGGRSSHNSKIQKQLSSW	478

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g02162	478	SUPERFAMILY	Protein kinase-like (PK-like)	95	271	IPR011009	-
	Gma11g02162	478	CDD	RIO2_C	94	274	IPR030484	GO:0004672
	Gma11g02162	478	Pfam	RIO1 family	106	280	-	-
	Gma11g02162	478	Coils	Coil	414	434	-	-
	Gma11g02162	478	MobiDBLite	consensus disorder prediction	374	425	-	-
	Gma11g02162	478	MobiDBLite	consensus disorder prediction	442	478	-	-
	Gma11g02162	478	Gene3D	-	1	90	IPR036388	-
	Gma11g02162	478	PANTHER	BNAA01G19540D PROTEIN	1	478	-	-
	Gma11g02162	478	PANTHER	SER/THR-PROTEIN KINASE RIO2	1	478	-	-
	Gma11g02162	478	SMART	rio_2	64	284	IPR000687	GO:0004674\|GO:0005524
	Gma11g02162	478	MobiDBLite	consensus disorder prediction	453	467	-	-
	Gma11g02162	478	SUPERFAMILY	"Winged helix" DNA-binding domain	5	90	IPR036390	-
	Gma11g02162	478	Gene3D	Phosphorylase Kinase; domain 1	93	190	-	-
	Gma11g02162	478	MobiDBLite	consensus disorder prediction	374	414	-	-
	Gma11g02162	478	Pfam	Rio2, N-terminal	8	89	IPR015285	GO:0004674\|GO:0005524\|GO:0006468
	Gma11g02162	478	Gene3D	Transferase(Phosphotransferase) domain 1	192	339	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g02162	Gma-Chr11	36666582	36673365	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g02162	K07179		-	gmx:100797607	909.827

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma18g00408	18	3715728	3724247	Gma11g02162	11	36666582	36673365	GST