Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00391 ATGGCTCCATCTTCACTGTTTTCAAACATGCATCTCTTCTTCTTCTTTCTTCTTTCCTCCATACACCTCTCTCTACAACTCAACCACACCACCTCATTATTCTCACTCTCTTTCCCTCTCACACCACTCTCTCTCTCCACCAGCACCGCCTCCAAGATGATGCTACTCAACTCTCTCCTTGCAAACAACAACAACAACAACACACGACTTAAATCACCACCTTATTCCTCTCCCTACAACTACAAGTTGTCTTTCAAATACTCCATGGCTTTAATCGTGGACCTTCCCATTGGGACCCCACCGCAAGTTCAGCCCATGGTTTTGGACACCGGAAGCCAGCTCTCGTGGATTCAGTGTCACAAAAAAGCACCCGCTAAGCCTCCCCCAACGGCGTCGTTTGACCCTTCTCTCTCCTCCACCTTCTCTATCCTTCCGTGTACTCACCCTGTCTGCAAGCCGCGAATTCCCGATTTTACCCTCCCCACCTCCTGCGACCAGAACCGCCTCTGCCACTACTCCTACTTCTTCGCCGACGGCACCTACGCCGAGGGCAATCTCGTCAGAGAAAAATTCACCTTCTCCCGTTCCCTTTTTACCCCTCCTCTGATCCTCGGCTGCGCCACCGAGTCCACCGACCCCAGGGGCATTTTGGGAATGAACCGTGGACGCCTCTCTTTCGCTTCGCAGTCCAAAATTACTAAATTCTCATACTGTGTCCCCACCCGCGAGACCCGACCCGGTTACACTCCAACCGGGTCGTTCTACCTTGGCAACAACCCGAACTCTAACACATTTAAATACATCGCAATGTTGACTTTTGGTCAGAGTCAACGCATGCCGAATCTCGACCCTTTGGCCTACACTGTAGCCTTACAGGGGATAAGAATCGGAGGAAGAAAACTCAACATCTCGCCGGCGGTTTTTCGTGCTGATGCTGGCGGGTCGGGTCAAACTATGGTTGACTCCGGATCCGAGTTCACTTACCTTGTTAACGAGGCTTATGATAAGGTGCGGGCTGAGGTGGTTAGGGCTGTGGGCCCCAGGATGAAGAAGGGTTACGTGTACGGTGGTGTTTCGGACATGTGTTTTGATGGGAATGCAGTTGAGATCGGACGATTGATAGGGGACATGGTGTTTGAGTTCGAGAATGGGGTGCAAATAGTGATTCCCAAGGAGAGGGTTCTGGCTACCGTGGAGGGTGGGGTCCACTGCGTAGGGATTGCGAACTCTGATAAATTGGGTGCGGCCAGTAACATTATTGGGAATTTTCATCAGCAGAATCTGTGGGTAGAGTTTGATCTGGTCAATCGCAGAGTGGGTTTCGGTACGGCTGATTGTAGCAGATTGTCTAACTAG 1356 0.5118 MAPSSLFSNMHLFFFFLLSSIHLSLQLNHTTSLFSLSFPLTPLSLSTSTASKMMLLNSLLANNNNNNTRLKSPPYSSPYNYKLSFKYSMALIVDLPIGTPPQVQPMVLDTGSQLSWIQCHKKAPAKPPPTASFDPSLSSTFSILPCTHPVCKPRIPDFTLPTSCDQNRLCHYSYFFADGTYAEGNLVREKFTFSRSLFTPPLILGCATESTDPRGILGMNRGRLSFASQSKITKFSYCVPTRETRPGYTPTGSFYLGNNPNSNTFKYIAMLTFGQSQRMPNLDPLAYTVALQGIRIGGRKLNISPAVFRADAGGSGQTMVDSGSEFTYLVNEAYDKVRAEVVRAVGPRMKKGYVYGGVSDMCFDGNAVEIGRLIGDMVFEFENGVQIVIPKERVLATVEGGVHCVGIANSDKLGAASNIIGNFHQQNLWVEFDLVNRRVGFGTADCSRLSN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00391 451 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 451 - -
Gma18g00391 451 PANTHER ASPARTYL PROTEASE-RELATED 10 451 IPR001461 GO:0004190|GO:0006508
Gma18g00391 451 Pfam Xylanase inhibitor N-terminal 93 247 IPR032861 -
Gma18g00391 451 ProSiteProfiles Peptidase family A1 domain profile. 91 442 IPR033121 -
Gma18g00391 451 Gene3D Acid Proteases 72 253 IPR021109 -
Gma18g00391 451 SUPERFAMILY Acid proteases 92 449 IPR021109 -
Gma18g00391 451 Pfam Xylanase inhibitor C-terminal 286 442 IPR032799 -
Gma18g00391 451 CDD pepsin_A_like_plant 92 446 IPR034161 -
Gma18g00391 451 Gene3D Acid Proteases 255 451 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00391 Gma-Chr18 3539733 3541088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00391 93 449 Miscellaneous Gene Families AT1G44130 23.325 1.51e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00391 - - gmx:100806624 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00391 18 3539733 3541088 Gma11g02178 11 36888592 36890387 GST