Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02178 ATGCCTCCATCATCACTGTTTTCAAACATGCATTTCTTGTTCTTTTTTCTTCTCTCCTCCATACACCTCTCTGTACAACTCAACCACACCACCACCACCACTAACAACTCAACCTCATTATTCTCACTCTCTTTCCCTCTCACATCACTCTCCCTCTCCACCAACACCGCTCTCAAGATGATGCTACGCAACTCACTCATTGCAAACACAAACAACAACAACACACAACTTAAATCACCACCTTCTTCTCCTTACAACTACAAGTTGTCTTTCAAATACTCCATGGCTTTAATCGTGGACCTTCCCATTGGTACCCCACCGCAGGTCCAGCCCATGGTGTTGGACACCGGAAGCCAGCTCTCGTGGATTCAGTGTCACAAAAAAGCACCCGCGAAGCCTCCCCCAACGGCGTCGTTTGACCCTTCTCTCTCCTCTACCTTTTCTACCCTTCCGTGTACTCACCCTGTCTGCAAGCCCCGAATTCCCGATTTTACCCTCCCCACCTCCTGCGACCAGAACCGCCTCTGCCACTACTCCTACTTCTACGCCGACGGCACTTACGCCGAGGGCAATCTCGTCAGAGAAAAATTCACTTTTTCGCGTTCCCTTTTTACCCCCCCTCTCATCCTCGGCTGCGCCACCGAGTCCACCGACCCCAGGGGCATTTTGGGAATGAACCGTGGACGCCTCTCCTTCGCTTCCCAGTCCAAAATTACAAAATTCTCCTACTGTGTCCCCACCCGCGTGACCCGACCTGGGTACACTCCAACCGGGTCGTTCTACCTTGGCCACAACCCGAATTCCAACACGTTTCGGTACATCGAAATGTTGACTTTTGCTCGGAGTCAACGCATGCCGAATCTCGATCCTTTGGCCTACACTGTAGCCTTACAGGGGATAAGAATCGGAGGAAGAAAACTCAACATCTCGCCGGCGGTTTTTCGTGCCGATGCTGGTGGGTCGGGTCAAACCATGCTTGACTCCGGATCCGAGTTTACTTACCTTGTTAACGAGGCTTATGATAAAGTGCGGGCTGAAGTAGTTAGGGCTGTGGGCCCCAGGATGAAGAAGGGTTACGTGTACGGTGGTGTTGCGGACATGTGTTTCGATGGGAATGCGATTGAGATCGGACGGCTAATAGGGGACATGGTGTTTGAGTTCGAGAAGGGGGTGCAAATAGTGGTTCCCAAGGAGAGGGTTCTGGCTACCGTGGAGGGTGGGGTTCACTGCATCGGGATTGCGAACTCTGATAAATTGGGTGCGGCCAGTAACATTATTGGGAATTTCCATCAGCAGAATCTGTGGGTGGAGTTTGATCTGGTCAATCGCAGAATGGGTTTTGGTACGGCTGATTGTAGTAGATTGGCTAAGTAG 1374 0.5131 MPPSSLFSNMHFLFFFLLSSIHLSVQLNHTTTTTNNSTSLFSLSFPLTSLSLSTNTALKMMLRNSLIANTNNNNTQLKSPPSSPYNYKLSFKYSMALIVDLPIGTPPQVQPMVLDTGSQLSWIQCHKKAPAKPPPTASFDPSLSSTFSTLPCTHPVCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSLFTPPLILGCATESTDPRGILGMNRGRLSFASQSKITKFSYCVPTRVTRPGYTPTGSFYLGHNPNSNTFRYIEMLTFARSQRMPNLDPLAYTVALQGIRIGGRKLNISPAVFRADAGGSGQTMLDSGSEFTYLVNEAYDKVRAEVVRAVGPRMKKGYVYGGVADMCFDGNAIEIGRLIGDMVFEFEKGVQIVVPKERVLATVEGGVHCIGIANSDKLGAASNIIGNFHQQNLWVEFDLVNRRMGFGTADCSRLAK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02178 457 Pfam Xylanase inhibitor N-terminal 99 251 IPR032861 -
Gma11g02178 457 SUPERFAMILY Acid proteases 98 455 IPR021109 -
Gma11g02178 457 ProSiteProfiles Peptidase family A1 domain profile. 97 448 IPR033121 -
Gma11g02178 457 Gene3D Acid Proteases 261 457 IPR021109 -
Gma11g02178 457 Pfam Xylanase inhibitor C-terminal 292 448 IPR032799 -
Gma11g02178 457 Gene3D Acid Proteases 70 259 IPR021109 -
Gma11g02178 457 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 457 - -
Gma11g02178 457 CDD pepsin_A_like_plant 98 452 IPR034161 -
Gma11g02178 457 PANTHER ASPARTYL PROTEASE-RELATED 10 457 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02178 Gma-Chr11 36888592 36890387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02178 99 457 Miscellaneous Gene Families AT1G44130 23.929 4.97e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02178 - - gmx:100803089 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00391 18 3539733 3541088 Gma11g02178 11 36888592 36890387 GST