Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00382 ATGACCTCCATGCTGGTGCTAAATGACCTCTACGCCAATGCAAAAGATATAACGGAGAAGCAGAAGAGGAGGCAAGCAGTCACAAATGACCTCACGTTGGTGCTAATGAGATTATATGTTGCCGCTATTGATGAAGAACCTTTTATAGGGGTGAATATTGGTAGAGATCTCTCAGACATGCCTCACCCCACTCAAGTAGTAGCACTACTTAAAGCCCAGCAAATTCGACATGTTAGGCTGTATGATGCCGACCAAGCTATGCTCATTGCTCTTGCAAACACAAGAATTCAAGTTGCTGTGTCTGTCCCTAATCAAGAGATCCTTGCAATTGGTCAATCAAATACCACAGCTGCGAAATGGGTTTCCCATAATGTGATAGCACATTACCCTGCCACTAACATAACTACTATTTGTGTTGGTTCTGATGTCTTAACTACCCTCCCCTATGCAGCAAAAGTGCTTGTCAGTGCCCTTAAGTTCATTCACTCAGCCCTCGTGGCATCCAATCTTGATCACCAAATCAAAGTCTCAACACCCCTTTCCTCTTCCATGATCCTTGATTCATTTCCACCTTCACAAGCCTTCTTCAACCGCTCACTGAATCCAGTCTTGGTTCCAATGCTTGATTTCTTGCAAACCACTGGCTCTTATCTCATGCTCAACATCTACCCTTACTATGACTACATGCAGTCGAATGGTGTGATTCCATTGGACTATGCACTCTTCAAACCCCTCCCTCCAAACAAAGAAGCCATTGATTCCAATTCCCTTCTCCACTACTCCAATGTGTTTGATGCTGCGGTTGATGCTGCATACGTTGCCATGGCTTTTCTAAATTACACTAACATTCGTGTGGTGGTGACAGAAACAGGCTGGCCCTCAAAAGGTGACTCTAATGAGCCTGATGCAACAGTGGAAAATGCAAACACTTACAACAGCAATTTGATCAAGCATGTGCTTAACATAACCGGGACTCCGAAACACCCCGGAATTGGTGTTAGTACTTACATCTATGAGCTCTACAATGAGGATGCAAAGGCAGGGCCATTGTCAGAGAAGAACTGGGGTTTGTTTGATGCAAATGGTAAACCTGTTTATGTTTTGCACTTGACAGAATCAGGAGGAGTGTTGGCAAATGACACCACCAATCAAACTTACTGTGTTGCAAAGGATGGTGCTGATCCTAAGATGCTGCAGGCTGGAATAGATTGGGCATGTGGACCTGGCAAGGTGGATTGCTCTCCTTTGCTGCAAGGACAACCATGTTATGAACCAGACAATGTGGTGGCACATGCAAATTATGCTTTTGACACTTACTATCATCAGATGGGAAAGTCTCCTCAGTCTTGTGATTTCAATGGCATGGCTACAATCTCCACCACCAATCCAAGTCATGGATCCTGTGTATTTCCAGGAAGTCTTGGCAACAATGGCACCTTCCCCAACGTCACGTTATCATCAATGAATTCCACAAATTCAGATTCTTCTGCCTGCAATCTCCATAGTGGTGAATTGGGAATTAGAAGCCTTCTAATGGTGATAGTACTTCTACTATGGGGAGTGGCTTTGCTATAA 1575 0.4425 MTSMLVLNDLYANAKDITEKQKRRQAVTNDLTLVLMRLYVAAIDEEPFIGVNIGRDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALANTRIQVAVSVPNQEILAIGQSNTTAAKWVSHNVIAHYPATNITTICVGSDVLTTLPYAAKVLVSALKFIHSALVASNLDHQIKVSTPLSSSMILDSFPPSQAFFNRSLNPVLVPMLDFLQTTGSYLMLNIYPYYDYMQSNGVIPLDYALFKPLPPNKEAIDSNSLLHYSNVFDAAVDAAYVAMAFLNYTNIRVVVTETGWPSKGDSNEPDATVENANTYNSNLIKHVLNITGTPKHPGIGVSTYIYELYNEDAKAGPLSEKNWGLFDANGKPVYVLHLTESGGVLANDTTNQTYCVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGQPCYEPDNVVAHANYAFDTYYHQMGKSPQSCDFNGMATISTTNPSHGSCVFPGSLGNNGTFPNVTLSSMNSTNSDSSACNLHSGELGIRSLLMVIVLLLWGVALL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00382 524 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 36 505 - -
Gma18g00382 524 ProSitePatterns Glycosyl hydrolases family 17 signature. 283 296 IPR000490 GO:0004553|GO:0005975
Gma18g00382 524 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 36 505 IPR044965 GO:0004553|GO:0005975
Gma18g00382 524 SMART X8_cls 385 470 IPR012946 -
Gma18g00382 524 Gene3D Glycosidases 48 375 - -
Gma18g00382 524 Gene3D - 379 471 - -
Gma18g00382 524 Pfam X8 domain 386 457 IPR012946 -
Gma18g00382 524 Pfam Glycosyl hydrolases family 17 49 368 IPR000490 GO:0004553|GO:0005975
Gma18g00382 524 SUPERFAMILY (Trans)glycosidases 49 369 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00382 Gma-Chr18 3382649 3387270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00382 44 516 Glycoside Hydrolase AT1G66250 72.421 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00382 K19891 - gmx:100811077 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00382 18 3382649 3387270 Gma18g00382 18 3382649 3387270 ECH
Gma18g00382 18 3382649 3387270 Gma11g02187 11 37070472 37074069 GST
Gma18g00382 18 3382649 3387270 Gma14g02087 14 51996660 51999669 PCT
Gma18g00382 18 3382649 3387270 Gma02g02314 02 49223462 49226141 PCT