Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02187 ATGGCCAAACACTTTCTTCTGCTTCTTTTTGCAGTATGCGTTGCTGCTATTGATGAAGAACCATTTATAGGGGTGAATATTGGAAGAGACCTCTCAGATATGCCTCACCCCACTCAAGTAGTAGCACTACTTAAAGCACAGCAAATTCGACATGTTAGGTTGTATGATGCTGACCAAGCTATGCTCATTGCCCTTGCAAACACAAGAATTCAAGTTGCTGTATCTGTCCCTAATCAAGAGATCCTAGCAATTGGTCAATCAAATACCACAGCAGCAAAATGGGTTTCCCATAATGTGATAGCACATTACCCTGCCACTAATATAACAACTATTTGTGTTGGTTCTGAGGTCTTAACTACCCTCCCCTATGCAGCGAAAGTGCTTGTCAGTGCCCTTAAGTTCCTTCACTCAGCACTTGTTGCTTCCAATCTTGATCACCAAATCAAAGTCTCAACACCCCTTTCCTCCTCCATGATCCTTGATTCATTCCCACCTTCACAAGCCTTCTTCAACCGCTCGCTGAATCCGGTCTTGGTTCCAATGCTTGATTTCTTGCAAACCACTGACTCTTATCTCATGCTCAACATCTACCCTTACTATGACTACATGCAGTCAAATGGTGTGATTCCATTGGACTATGCACTCTTCAAACCACTCCCTCCAAACAAAGAAGCCATTGATTCTAACACCCTTCTCCACTACTCCAATGTGTTTGATGCTGTGATTGATGCAGCATACTTTGCCATGGCTTTTCTTAATTACACTAACATTCCTGTGGTGGTGACAGAAACAGGTTGGCCATCAAAAGGTGACTCCAATGAACCTGATGCAACAGTGGAAAATGCAAACACTTACAACAGCAACTTGATCAAGCATGTGCTTAACATAACCGGAACTCCAAAACACCCCGGAATTGGTGTTAGTACTTTCATCTATGAGCTCTACAATGAGGATGCAAAGGCAGGACCATTGTCAGAGAAAAACTGGGGCTTATTTGATGCAAATGGAAAACCTGTTTATGTTTTGCACTTGACAGAATCAGGAGGAGTGTTGGCAAATGACACCACCAATCAAACTTACTGTGTTGCTAAGGATGGTGCTGATCCTAAGATGCTGCAGGCTGGAATAGATTGGGCTTGTGGACCTGGCAAGGTGGATTGCTCTCCTTTGCTGCAAGGACAACCATGTTATGAACCAGACAATGTGGTTGCACATGCAAATTATGCTTTTGACACTTACTATCATCAGATGGGAAAGTCTACTCAGTCTTGTGATTTCAATGACATGGCTACAATCTCCACCACCAATCCAAGTCATGGATCCTGTGTATTTCCAGGAAGTCTTGGAATCAATGGCAGCTTCCCCAACGTCACGTTATCATCACTGAATTCCACAAATTCAGTTTCTTCTGCCTCCAATCTCCATAGTGGTGAATTGGGAATTAGAAGCCTTCTAATGGTGATAGTACTTCTACTATGGGGAGTGGTTTTGCTATAA 1497 0.4302 MAKHFLLLLFAVCVAAIDEEPFIGVNIGRDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALANTRIQVAVSVPNQEILAIGQSNTTAAKWVSHNVIAHYPATNITTICVGSEVLTTLPYAAKVLVSALKFLHSALVASNLDHQIKVSTPLSSSMILDSFPPSQAFFNRSLNPVLVPMLDFLQTTDSYLMLNIYPYYDYMQSNGVIPLDYALFKPLPPNKEAIDSNTLLHYSNVFDAVIDAAYFAMAFLNYTNIPVVVTETGWPSKGDSNEPDATVENANTYNSNLIKHVLNITGTPKHPGIGVSTFIYELYNEDAKAGPLSEKNWGLFDANGKPVYVLHLTESGGVLANDTTNQTYCVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGQPCYEPDNVVAHANYAFDTYYHQMGKSTQSCDFNDMATISTTNPSHGSCVFPGSLGINGSFPNVTLSSLNSTNSVSSASNLHSGELGIRSLLMVIVLLLWGVVLL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02187 498 Gene3D Glycosidases 22 349 - -
Gma11g02187 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 6 479 - -
Gma11g02187 498 SUPERFAMILY (Trans)glycosidases 23 343 IPR017853 -
Gma11g02187 498 SMART X8_cls 359 444 IPR012946 -
Gma11g02187 498 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Gma11g02187 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Gma11g02187 498 Pfam X8 domain 360 431 IPR012946 -
Gma11g02187 498 Gene3D - 353 444 - -
Gma11g02187 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 479 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02187 Gma-Chr11 37070472 37074069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02187 18 490 Glycoside Hydrolase AT1G66250 72.211 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02187 K19891 - gmx:100804152 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00382 18 3382649 3387270 Gma11g02187 11 37070472 37074069 GST
Gma11g02187 11 37070472 37074069 Gma14g02087 14 51996660 51999669 PCT
Gma11g02187 11 37070472 37074069 Gma02g02314 02 49223462 49226141 PCT