Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00369 ATGGAAGAAAGTCCTGGTGGTCGCAGAAAGCGAGCACACCCTTCTTCTTCATCTCCTTCACCAATCtccaagaagccccaaaccttcccttcgttccaagacatccccaacctcccttcCAACATCAAATCCCTCTGCCATCTCATCGCCACCACCTCCGCCGCCTCCGTCGAGCACTCCCTCCAATCCGCCGCCATCTCCGTCACCCCCCACGACGTCGAAGAAGTCCTCAAACTCTCCTACGGCTTCCCCGGCCAGGCCGTCAAATTCTTCCGCTGGAGCGGCCGCCACCTAAACGACAACCACACGCCCTACTCCTGGAACCTCGTCGTTGACATCCTCGGCAAAAACCGCTTCTTTGACGCGATGTGGGACGCTATTAAGTCAATGAACAAAGAAGGGTTGCTCTCACTCGCCACATTCGCCTCTGTCTTCAGCAGCTATGTTGCAGCTGATAGAATCCGGGAAGCAATTATGGCATTCGAGATTATGGACAATTATTGTGTTGTGAGGGATGTTGTTGCTTTGAATTCGCTGTTGAGTGCTATTTGTAGCAATGGTAGGACTCTTGATGCTTGTGATTACTTGCAGGTTGCCAAGAAATTGGTCCGGCCGGATACCGATACTTATGCGATTTTAATGGAGGGGTGGGAAGGGGAGAATGGTGTAGTTGGTGCTAAGGAGACATTTGCTGAGATGGTGATTGAGATTGGATGGGATCCTTTGAATGTGCCGGCTTATGATTCGTTCTTGTGTACACTTGTTAGAGGACCTGATGGATTGCTTGAGGCTATTAAGTTTGTTGATTCGATGAGGGATAGGAGGTGTTTTCCTGGTGTGAGGTTTCTGAAGGCTGCATTGGATGAGTGTGTTAAGAGTCATGATGTTAGGACTGCTGAGTTTTTCTGGGAGGTGTTGGTGGTTGGGAAGGTGGTGCAGCCCACCGCTGAGATGTACAATTTGATGATTGGTTTGTGCTGCTATCGTGGTGACACCGATGCTGCGAGGAGGATGCTTGATGAGATGGTTTACCAAGGGGCTTTTCCTGATGTGGAGACTTATAACTTGTTGTTTAAGTTCTTGATCAAGGGGAGGAAGTTGCGGGAGGCTTCCGTGGTGTTTGCAGAGATGGTGAAGAATGAGTGTGTGCCCGAGCAGGATAACTGTGATGCGGCGGTTAAGGCGTATGTGGACTGTGGGGAGCCTGTTATGGCCATCAAGGTTTGGAAGTATTTGGTGGAGAATTATAAGAAGGATTTGGAGCGGACAGCGAATTTTCTGGTTGTGGGGCTGCGTGATTTGAATAGGCTCCCGGAGGCGGTTAAGTATGCTGAGGATATGATTGACAGGGAAATCAGGTTGTCCTCTAACACAATGTCAAAGCTGAGACAAAGCCTTATCAAGGAGAGAAGAGAATTTGTGTATGAAGACCTTTTGAGAAAGTCTAAGTCTCATTAG 1458 0.4719 MEESPGGRRKRAHPSSSSPSPISKKPQTFPSFQDIPNLPSNIKSLCHLIATTSAASVEHSLQSAAISVTPHDVEEVLKLSYGFPGQAVKFFRWSGRHLNDNHTPYSWNLVVDILGKNRFFDAMWDAIKSMNKEGLLSLATFASVFSSYVAADRIREAIMAFEIMDNYCVVRDVVALNSLLSAICSNGRTLDACDYLQVAKKLVRPDTDTYAILMEGWEGENGVVGAKETFAEMVIEIGWDPLNVPAYDSFLCTLVRGPDGLLEAIKFVDSMRDRRCFPGVRFLKAALDECVKSHDVRTAEFFWEVLVVGKVVQPTAEMYNLMIGLCCYRGDTDAARRMLDEMVYQGAFPDVETYNLLFKFLIKGRKLREASVVFAEMVKNECVPEQDNCDAAVKAYVDCGEPVMAIKVWKYLVENYKKDLERTANFLVVGLRDLNRLPEAVKYAEDMIDREIRLSSNTMSKLRQSLIKERREFVYEDLLRKSKSH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00369 485 PANTHER OS02G0711100 PROTEIN 22 484 - -
Gma18g00369 485 MobiDBLite consensus disorder prediction 1 30 - -
Gma18g00369 485 MobiDBLite consensus disorder prediction 11 30 - -
Gma18g00369 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 315 349 IPR002885 -
Gma18g00369 485 TIGRFAM PPR: pentatricopeptide repeat domain 318 350 IPR002885 -
Gma18g00369 485 TIGRFAM PPR: pentatricopeptide repeat domain 353 384 IPR002885 -
Gma18g00369 485 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 22 484 - -
Gma18g00369 485 Pfam PPR repeat family 317 361 IPR002885 -
Gma18g00369 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 350 384 IPR002885 -
Gma18g00369 485 Pfam PPR repeat 105 135 IPR002885 -
Gma18g00369 485 Gene3D Tetratricopeptide repeat domain 79 238 IPR011990 GO:0005515
Gma18g00369 485 Gene3D Tetratricopeptide repeat domain 259 431 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00369 Gma-Chr18 3227938 3229992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00369 303 469 Glycosyltransferase AT1G05670 26.744 2.39e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00369 - - gmx:100784707 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00369 18 3227938 3229992 Gma11g02202 11 37249876 37251336 GST