Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00355 ATGGAGGCGAAGAAATCGGGTTTGAATCTCCCAGCTGGGATGTCCGGAACCTCACTCCGGCTGGACACTGCAGCAGCATCTTCCATCTCGACCCTCAATTCTCCTTCTTCTCTCCGTTCCATCTCTAATCTCACCTCGCCTTCGAAATCCAACTCGGCTTGCAGCGACAGGTTCATTCCGTGCCGGTCCTCCTCGAGGTTGCACACGTTCGGGCTCCTGGACAGGCCCTCGCCGGTGAAGGAAGGGAGTAACGAGGCTTATTCCAGGTTGTTGAAATCAGAACTCTTTGGATCTGACTTTGCTTCTCCTTCTCTTTCTCTTTCTTCCCCTGCAGGTGCTGCTCCTCCTTCGCCGCTCAGCCCCAGCAAGAACATGCTCCGCTTCAAGACCGACCACTCCGTCGCGCCTTCTTCGCCTTATTCGCCGTCCATTTTGGGACAGCAGAATGCCTTTCCTTCTGACTCTTCTACCCCGCCTCCCAAACCTCCCAGGAAAGTCCTCAAGACGCCCCACAAGGCAAGTAAAATTGTTTTGGATGCCCCATCACTTCAAGATGACTTTTATTTGAATCTGGTGGACTGGTCCACACAAAATGTTCTTGCTGTGGGGCTAGGCACTTGTGTGTATTTATGGAGCGCTTCAAACAGCAAAGTGACTAAGTTATGTGACTTGGGGCCTTATGATGGTGTCTGCTCTGTCCAGTGGACCCGGGAGGGTTCTTTTATATCCATTGGTACAAATCTTGGTCAAGTTCAGGTTTGGGATGGAACTCAGTGTAAGAAGGTCAGAACCATGGGTGGGCATCAGACAAGGACTGGTGTTTTGGCATGGAATTCTCGCATTTTGGCTTCAGGGAGCAGAGATAGGAACATACTTCAGCATGACATGAGGATTCCGGGTGACTTTGTTAGCAAGCTTGTTGGCCACAAGTCTGAGGTATGTGGATTGAAATGGTCCAGTGATGACAGGGAACTTGCTTCTGGTGGTAATGATAATCAGCTCCTGGTATGGAATCAACACTCTCAGCAACCAGTTTTGAGACTTACCGAGCACACTGCTGCTGTGAAGGCCATTGCTTGGTCACCTCACCAAAGCAGTCTCCTTGTGTCCGGAGGTGGAACTGCTGATAGGTGTATTCGTTTTTGGAACACTACAAATGGCCATCAATTGAACTGTCTTGACACTGGGAGCCAGGTCTGCAACCTTGCTTGGAGTAAAAATGTGAATGAACTAGTAAGCACTCATGGGTACTCCCAAAATCAGATCATGGTGTGGAAATATCCATCATTGTCAAAGGTTGCAACTCTAACTGGCCACAGCATGCGAGTGCTATACCTTGCAATGTCTCCTGATGGCCAGACAATAGTAACTGGTGCAGGAGATGAGACTCTACGGTTTTGGAATGTTTTCCCATCAATGAAAGCACCTGTCCCGGTTAAAGATACAGGCCTTTGGTCACTGGGGCGCACACAAATTCGATGA 1482 0.4953 MEAKKSGLNLPAGMSGTSLRLDTAAASSISTLNSPSSLRSISNLTSPSKSNSACSDRFIPCRSSSRLHTFGLLDRPSPVKEGSNEAYSRLLKSELFGSDFASPSLSLSSPAGAAPPSPLSPSKNMLRFKTDHSVAPSSPYSPSILGQQNAFPSDSSTPPPKPPRKVLKTPHKASKIVLDAPSLQDDFYLNLVDWSTQNVLAVGLGTCVYLWSASNSKVTKLCDLGPYDGVCSVQWTREGSFISIGTNLGQVQVWDGTQCKKVRTMGGHQTRTGVLAWNSRILASGSRDRNILQHDMRIPGDFVSKLVGHKSEVCGLKWSSDDRELASGGNDNQLLVWNQHSQQPVLRLTEHTAAVKAIAWSPHQSSLLVSGGGTADRCIRFWNTTNGHQLNCLDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLSKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKAPVPVKDTGLWSLGRTQIR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00355 493 MobiDBLite consensus disorder prediction 132 170 - -
Gma18g00355 493 ProSiteProfiles Trp-Asp (WD) repeats profile. 306 347 IPR001680 GO:0005515
Gma18g00355 493 CDD WD40 209 468 - -
Gma18g00355 493 SMART WD40_4 258 295 IPR001680 GO:0005515
Gma18g00355 493 SMART WD40_4 341 383 IPR001680 GO:0005515
Gma18g00355 493 SMART WD40_4 299 338 IPR001680 GO:0005515
Gma18g00355 493 SMART WD40_4 386 426 IPR001680 GO:0005515
Gma18g00355 493 SMART WD40_4 215 255 IPR001680 GO:0005515
Gma18g00355 493 SMART WD40_4 429 468 IPR001680 GO:0005515
Gma18g00355 493 ProSitePatterns Trp-Asp (WD) repeats signature. 370 384 IPR019775 -
Gma18g00355 493 SUPERFAMILY WD40 repeat-like 184 469 IPR036322 GO:0005515
Gma18g00355 493 PANTHER PROTEIN FIZZY-RELATED 3 7 493 - -
Gma18g00355 493 MobiDBLite consensus disorder prediction 134 154 - -
Gma18g00355 493 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 7 493 IPR033010 GO:0010997|GO:0097027|GO:1904668
Gma18g00355 493 Pfam Eukaryotic translation initiation factor eIF2A 326 466 IPR013979 -
Gma18g00355 493 ProSitePatterns Trp-Asp (WD) repeats signature. 455 469 IPR019775 -
Gma18g00355 493 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 306 338 - -
Gma18g00355 493 ProSiteProfiles Trp-Asp (WD) repeats profile. 436 469 IPR001680 GO:0005515
Gma18g00355 493 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 436 469 - -
Gma18g00355 493 MobiDBLite consensus disorder prediction 29 55 - -
Gma18g00355 493 Gene3D - 124 470 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00355 Gma-Chr18 3050147 3055114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00355 303 469 Miscellaneous Gene Families AT5G08390 22.159 4.02e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00355 K03364 - gmx:100808928 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00355 18 3050147 3055114 Gma18g00355 18 3050147 3055114 ECH
Gma18g00355 18 3050147 3055114 Gma11g02220 11 37484824 37488901 GST