Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00272 ATGGTTGATTTACATTGGAAATCAAAGATGCCTAGTTCCAAAACACCAAAACTCTCTCTCTCCGACAACAAGTCCTTACCCTCTTTGCAACTACCCTTCCGCACCACAGATATCTCTCCCGCCGCTCCTTCCGTTTGCGCCGCTTACGACTACTATCTCCGTCTTCCTCAACTCAGAAAGCTTTGGAACTCCACTGATTTTCCTAATTGGAACAACGAACCGATTCTAAAACCAATTTTGCAAGCTCTCGAAATCACGTTCCGCTTTCTTTCCATTGTTCTCTCCGATCCCAGACCTTACTCCAACCACAGAGAATGGACTCGCCGGATAGAGTCTCTCATCATGCATCAAATTGAAATCATTGCCATACTTTGTGAAGAAGAGGAACAAAATTCCGACACACGTGGCACTGCACCAACCGCTGATCTCAGCAGCAGCAATAGCAGCGTGAGCAGAAGCTACAGCGAGGCGAGCCTGCTTCCTCGGCTTGCCACGTGGTACAAATCCAGGGACGTGGCGCAGAGGATCCTTCTCTCCGTGGAATGCCAAATGAGGAGGTGCTCCTACACGCTTGGTTTGGGCGAGCCGAACCTAGCGGGGAAGCCGAGCCTGCTCTACGACCTCGTGTGCAAGCCGAATGAGATCCACGCGCTGAAGACGACGCCGTACGACGAGCGCGTGGAGAACCACGAGAACCACGCGGTGCACGCCACGCACCAGATCGCGGAGTCGTGGATTCACGCGTCGCGGAAGGTTCTGGAGAGAATCGCGGACGCGGTGCTCTCCAGAACCTTCCTGAAAGCAGCAGAGGACTGCTACGCCGTGGAGAGGATCTGGAAGCTTCTCGCGGAGGTGGAGGACCTCCACCTGATGATGGATCCGGACGATTTCTTGAGGCTAAAGAATCAACTCTCGGTGAAATCCTCGAGCGGCGAAACGGCATCGTTCTGCTTCAGATCGAATGAGTTAGTGGAACTGACGAAGATGTGCAGAGATCTGAGGCACAAGGTGCCGGAGATATTGGAGGTGGAGGTGGATCCGAAGGGAGGACCGAGGATTCAAGAGGCGGCGATGAAGCTCTACGTTTCGAAGAGCGAGTTCGAGAAGGTTCACTTGTTGCAGGCGATGCAGGCGATTGAGGCGGCGATGAAGAGATTCTTCTACGCGTATAAGCAGGTGTTGGCGGTGGTGATGGGAAGTTCAGAGGCTAACGGTAACCGAGTTGGGTTGAGTTGCGACTCGGCTGACTCGTTGACTCAGATTTTCCTTGAACCGACGTATTTTCCAAGCTTGGATGCCGCCAAGACTTTTCTTGGATACCTGTGGGATAATAACGATAATAACAAATGGATATGA 1356 0.5251 MVDLHWKSKMPSSKTPKLSLSDNKSLPSLQLPFRTTDISPAAPSVCAAYDYYLRLPQLRKLWNSTDFPNWNNEPILKPILQALEITFRFLSIVLSDPRPYSNHREWTRRIESLIMHQIEIIAILCEEEEQNSDTRGTAPTADLSSSNSSVSRSYSEASLLPRLATWYKSRDVAQRILLSVECQMRRCSYTLGLGEPNLAGKPSLLYDLVCKPNEIHALKTTPYDERVENHENHAVHATHQIAESWIHASRKVLERIADAVLSRTFLKAAEDCYAVERIWKLLAEVEDLHLMMDPDDFLRLKNQLSVKSSSGETASFCFRSNELVELTKMCRDLRHKVPEILEVEVDPKGGPRIQEAAMKLYVSKSEFEKVHLLQAMQAIEAAMKRFFYAYKQVLAVVMGSSEANGNRVGLSCDSADSLTQIFLEPTYFPSLDAAKTFLGYLWDNNDNNKWI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00272 451 Pfam Hs1pro-1 protein C-terminus 184 444 IPR009743 -
Gma18g00272 451 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 449 IPR038759 -
Gma18g00272 451 MobiDBLite consensus disorder prediction 1 22 - -
Gma18g00272 451 Pfam Hs1pro-1 N-terminus 1 181 IPR009869 GO:0006952
Gma18g00272 451 Gene3D - 206 342 - -
Gma18g00272 451 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 210 438 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00272 Gma-Chr18 2255027 2256879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00272 - - gmx:100802892 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00272 18 2255027 2256879 Gma18g00272 18 2255027 2256879 ECH
Gma18g00272 18 2255027 2256879 Gma11g02301 11 38399629 38400969 GST
Gma18g00272 18 2255027 2256879 Gma14g00518 14 4955464 4957096 PCT
Gma18g00272 18 2255027 2256879 Gma02g02410 02 50180503 50182300 PCT
Gma14g00518 14 4955464 4957096 Gma18g00272 18 2255027 2256879 PCT
Gma02g02410 02 50180503 50182300 Gma18g00272 18 2255027 2256879 PCT