Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02301 ATGCCAAGTTCCGACATGCCTTCCAAAACTCTCAAACTCTCTCTCTCCGACAACAAGTCCTTACCCTCTTTGCAACTACCCTTCCGCACCACAGATATCTCTCACGCCGCACCTTCTGTTTGCGCCACTTACGACTACTATCTCCGTCTTCCTCAACTCAGAAAGCTTTGGAACTCCTCAGATTTTCCTAATTGGAACAACGAACCAATCTTAAAACCTATCTTGCAAGCTCTCGAAATCACCTTCCGCTTTCTCTCCATTGTTCTCTCCGATCCAAGACCTTACTCCAACCACAGAGAATGGACTCGCAGGATAGAGTCTCTTATCACACATCAAATTGAAATCATTGCCATACTTTGTGAAGATGAGGAACAAAATTCCGACACACGTGGCACTGCACCAACCGCTGATCTCAGCAGGAACAATAGCAGCGAGAGCAGAAGCTACAGCGAGGCAAGCCTGCTTCCGCGGCTTGCCACGTGGTACAAATCCAAGGACGTAGCGCAGAGGATCCTTCTCTCAGTTGAATGCCAAATGAGGAGGTGTTCCTACACGCTGGGTTTGGGTGAGCCGAACCTAGCGGGCAAACCGAGCCTGCTCTACGACCTCGTGTGCAAGCCGAACGAGATCCACGCGCTGAAGACGACGCCGTACGATGAGCGCGTAGAGAATCACGAGAACCACGCGTTGCACGCGACGCACCAGATCGCCGAGTCGTGGATCCACGCGTCGCGGAAGGTTCTAGAGAGGATCGCAGACGCGGTCCTCTCCAGAACCTTCGAGAAGGCGGCTGAGGACTGCTACGCCGTGGAAAGGATCTGGAAGCTTCTCGCGGAGGTGGAGGACCTCCACCTGATGATGGATCCGGACGATTTCTTGAGACTGAAGAATCAGCTCTCGGTGAAATCCTCCGGCGGCGAAACGGCTTCGTTCTGCTTCAGGTCGAAGGAGTTGGTTGAACTGACGAAGATGTGCAGAGATCTGAGGCACAAGGTGCCGGAGATATTGGAGGTGGAGGTGGATCCGAAGGGAGGACCGAGGATTCAAGAGGCGGCGATGAAGCTCTACGTTTCGAAGAGCGCGTTCGAGAAGGTTCACTTGTTGCAGGCGATGCAGGCGATTGAGGCGGCGATGAAGAGATTCTTCTACGCGTATAAGCAGGTGTTGGCGGTGGTGATGGGAAGCTCCGAGGCTAACGGTAACCGAGTTGGGTTGAGTTGCGACTCGGCTGACTCGTTGACTCAGATTTTCCTTGAACCGACGTATTTTCCAAGCTTGGATGCCGCCAAGACTTTTCTTGGATACTTGTGGGATAATAACGATAATAACAAATGGATATGA 1341 0.5242 MPSSDMPSKTLKLSLSDNKSLPSLQLPFRTTDISHAAPSVCATYDYYLRLPQLRKLWNSSDFPNWNNEPILKPILQALEITFRFLSIVLSDPRPYSNHREWTRRIESLITHQIEIIAILCEDEEQNSDTRGTAPTADLSRNNSSESRSYSEASLLPRLATWYKSKDVAQRILLSVECQMRRCSYTLGLGEPNLAGKPSLLYDLVCKPNEIHALKTTPYDERVENHENHALHATHQIAESWIHASRKVLERIADAVLSRTFEKAAEDCYAVERIWKLLAEVEDLHLMMDPDDFLRLKNQLSVKSSGGETASFCFRSKELVELTKMCRDLRHKVPEILEVEVDPKGGPRIQEAAMKLYVSKSAFEKVHLLQAMQAIEAAMKRFFYAYKQVLAVVMGSSEANGNRVGLSCDSADSLTQIFLEPTYFPSLDAAKTFLGYLWDNNDNNKWI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02301 446 Gene3D - 201 434 - -
Gma11g02301 446 Pfam Hs1pro-1 N-terminus 1 176 IPR009869 GO:0006952
Gma11g02301 446 Pfam Hs1pro-1 protein C-terminus 179 439 IPR009743 -
Gma11g02301 446 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 444 IPR038759 -
Gma11g02301 446 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 205 433 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02301 Gma-Chr11 38399629 38400969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02301 - - gmx:547603 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02301 11 38399629 38400969 Gma11g02301 11 38399629 38400969 ECH
Gma18g00272 18 2255027 2256879 Gma11g02301 11 38399629 38400969 GST
Gma11g02301 11 38399629 38400969 Gma14g00518 14 4955464 4957096 PCT
Gma11g02301 11 38399629 38400969 Gma02g02410 02 50180503 50182300 PCT
Gma14g00518 14 4955464 4957096 Gma11g02301 11 38399629 38400969 PCT
Gma02g02410 02 50180503 50182300 Gma11g02301 11 38399629 38400969 PCT