Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00236 ATGGAAAACTCAGACGAGCAACTTCCCTTCTCTCCACAAAACCCtaacaatgccgaagaagaagacgacgacatcgaagagccagaagacgaagacgaagaagaggaggaggacgacgacgacgacgacgacgtcgTTTCGCAGGAGCAATCCCCATTGTCGCGGCTGCGCGAGCAGCGTTCGAAGCTGGAAACCCTGTCCCGGCGATTGGCGTCGGAGCTGGTCCCAATCCGAGTCCACGACGTGCTGATTCGCGGCAACACGAAGACAAAGGAGTGGGTGATCGAGGCGGAGCTCAAGCTCCTCGAGGAGGCCACCAACGTGCAGGAGCTCATTCGCGCCTCCGAAATCGCCCTCGCCAGGCTCCGCGGCCTCGAGATTTTCGACACCGCCGAGCTCACGCTCCAGGCCGGTCCGCCGGAGCTGCCTCACACCGCCAATGTCGTCGTCGACGTCGTCGAGTCCGCCAACAGAATCTCCGGCGATTTCGGCGTTTACACCAAACCCGCGACTAGTTCTTGGTCTGCTGAAGGTGGTCTTAAGTACAAAAACTTATTAGGTTATGGTGATCTATGGGATGCCTCGTTGGCCTATGGTGCCAACCAAACAACAGAGGTAAGTGTAGGAGTGTATGCCCCTCGACTGAAAGGATTGTTAACCCCCTTTGTAGCACGACTATCCATGCTTTCTCAAGATTGGCAAGAGTTTTCTTCATATAAAGAGCAGTTGCTAGGCTTGTCTCTAGGCTTAATCTCAACAAGGCACCATGACTTAGTCTACACTCTTGGATGGCGTACCTTGACTGATCCATCACAAATGTCATCCAGGTCTATAAGGAGGCAACTTGGGCATGGTTTACTATCATCCTTGAAGTATACATTTAAAATTGACAGGAGAAACTCACCAATTAGGCCTACAAATGGATATGCTTTTCTTTCTACCACTCACTTTGGTGGCCTTACACCAGATCATCGGAGCTTGCGATTTCTGCGCCAGGAATTTGATGTTCGTTGTGCCATCCCCTTTGGGTTTTATAATACGGCACTTAACCTTGGGATTTCTGCCGGTGCTGTTTTTCCATGGGGGCATGGCTTCATGAACAAGCCATCTCCGCTTCCTGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTTGGAGGACCAATAACATTGTGGGGATTTAAAACTAGGGGATTAGGTCCTACTGAACCACGAAGACGAAGTAGAGATGGAATTATTGATGACAGTGATGATTCCTCTAGATGGGACTTCATTGGAGGAGATCTAGCTGTTACTGCATTTGCAGACCTGTCTTTTGATCTTCCAATTAGGTGGTTGAGAGATCATGGAATTCATGGTCATGTTTTTGCTGGTGCTGGGAATACTGCTAAATTAACTCAGAATGAATATAAGCACTTTTCACCTCGGAAGTTCTTAGAATCCTTTCGAACATCTGTGGGATGTGGATTTGTTGTTCCCACTAGACTTTTTCGCCTAGAGGGTAATTTCTATTACATACTCAAGCAGAATGAGCATGATCGTGGGAAAACTGGATTTAGGTTCAGCTTCTCGGCTCCTTCTTAG 1593 0.457 MENSDEQLPFSPQNPNNAEEEDDDIEEPEDEDEEEEEDDDDDDDVVSQEQSPLSRLREQRSKLETLSRRLASELVPIRVHDVLIRGNTKTKEWVIEAELKLLEEATNVQELIRASEIALARLRGLEIFDTAELTLQAGPPELPHTANVVVDVVESANRISGDFGVYTKPATSSWSAEGGLKYKNLLGYGDLWDASLAYGANQTTEVSVGVYAPRLKGLLTPFVARLSMLSQDWQEFSSYKEQLLGLSLGLISTRHHDLVYTLGWRTLTDPSQMSSRSIRRQLGHGLLSSLKYTFKIDRRNSPIRPTNGYAFLSTTHFGGLTPDHRSLRFLRQEFDVRCAIPFGFYNTALNLGISAGAVFPWGHGFMNKPSPLPERFYLGGDFSPVCTLGGPITLWGFKTRGLGPTEPRRRSRDGIIDDSDDSSRWDFIGGDLAVTAFADLSFDLPIRWLRDHGIHGHVFAGAGNTAKLTQNEYKHFSPRKFLESFRTSVGCGFVVPTRLFRLEGNFYYILKQNEHDRGKTGFRFSFSAPS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00236 530 Coils Coil 53 73 - -
Gma18g00236 530 MobiDBLite consensus disorder prediction 17 47 - -
Gma18g00236 530 MobiDBLite consensus disorder prediction 1 16 - -
Gma18g00236 530 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 169 528 - -
Gma18g00236 530 MobiDBLite consensus disorder prediction 1 59 - -
Gma18g00236 530 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 14 528 IPR039910 -
Gma18g00236 530 Pfam Omp85 superfamily domain 184 527 IPR000184 GO:0019867
Gma18g00236 530 Gene3D membrane protein fhac 76 155 - -
Gma18g00236 530 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 14 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00236 Gma-Chr18 1902957 1907820 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00236 K07277 - gmx:100785408 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00236 18 1902957 1907820 Gma18g00236 18 1902957 1907820 ECH
Gma18g00236 18 1902957 1907820 Gma11g02340 11 38831888 38836524 GST
Gma18g00236 18 1902957 1907820 Gma14g00485 14 4596876 4600526 PCT
Gma14g00485 14 4596876 4600526 Gma18g00236 18 1902957 1907820 PCT