Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02340 ATGGAAAATTCAGACGAACAACTTCCCTTCTCTCCACCAAACCCTAACAATGCCGAAGAAGACGACGAAATCGACGAACCagaagacgaagacgaagaagaggaggaagacgacgacgacgacgatgtcgtgtcgcaggagcaatccccgttgtcgcggctgcgcgagcagcgttcgaagtTAGAAACCCTGTCCCGGCGATTGGCGTCGGAGCTGGTCCCAATCCGAGTCCACGACGTGCTGATTCGCGGCAACACGAAGACGAAGGCGTGGCTGATCGAGGCGGAGCTCAAGCTCCTCGAGGAGGCCACCACCGTGCAGGAGCTAATTCGCGCCTCCGAAATCGCCCTCGCCAGGCTCCGTGGCCTCGAGATTTTCGACACCGCCGAGCTTACGCTCCAGGCCGGGCCGCCGGAGCTTCCTCACACCGCCAATGTTATCGTCGACGTCGTCGAGACCGCCAACAAAATCTCCGGCGATTTCGGCGTTTACACCAAACCCGCGACTAGTTCTTGGTCTGCTGAAGGTGGTCTTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCCTCTTTGGCCTATGGTGCCAACCAAACAACAGAGGTAAGTGTAGGAGTGTATGCCCCTCGACTGAAAGGATTGCTAACCCCTCTTGTAGCACGACTATCCATGCTTTCCCAAGATTGGCAAGAGTTTTCTTCATACAAAGAGCAGTTGTTAGGCTTGTCTCTTGGCTTAATCTCAGCAAGGCATCATGACTTAGTCTACACTCTTGGATGGCATACCTTGACTGATCCATCACAAATGTCATCCAGGTCTATAAGGAGGCAACTTGGGCATGGTTTAGTATCATCTTTGAAGTATACATTTAAAATTGACAGGAGAAACTCACCAATTAGGCCTACAAAGGGATATGCTTTTCTATCTACCACTCACTTTGGTGGCCTTACACCAGATCCTCGGAGCTTGCGATTTCTGCGCCAGGAATTTGATGTTCGCTGTGTCATCCCCTTTGGGTTTTATAATACAGCACTTAACCTTGGGATTTCTGCTGGTGCTGTTTTTCCATGGGGGCATGGCTTCATGAACAAGCCATCTCCGCTTCCTGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACTCTAGGAGGGCCAATAACATTGTGGGGATTTAAAACTAGGGGATTAGGTCCTACTGAACCACAAAGGCGAAGTAGAGATGGAATTATTGATGACAATGATGATTCCTCTAGATGGGACTTCATTGGAGGAGATCTAGCTGTTACTGCATTTGCAGACTTGTCTTTTGATCTTCCAGTTAGGTGGTTGAGAGATCATGGAATTCATGGTCATGTTTTTGCTGGTGCTGGGAATACTGCTAAATTAACTCAGAATGAATATAAGCACTTTTCACCTCGGAAGTTCTTAGAATCCTTTCGAACATCGGTGGGATGTGGATTTGTTGTTCCTACTAGACTTTTTCGCCTAGAGGGTAATTTCTATTACATACTCAAGCAGAATGAGCATGATCGTGGGAAAACTGGATTTAGGTTCAGCTTCTCAGCTCCTTCTTAG 1587 0.4449 MENSDEQLPFSPPNPNNAEEDDEIDEPEDEDEEEEEDDDDDDVVSQEQSPLSRLREQRSKLETLSRRLASELVPIRVHDVLIRGNTKTKAWLIEAELKLLEEATTVQELIRASEIALARLRGLEIFDTAELTLQAGPPELPHTANVIVDVVETANKISGDFGVYTKPATSSWSAEGGLKYKNLLGYGDLWDASLAYGANQTTEVSVGVYAPRLKGLLTPLVARLSMLSQDWQEFSSYKEQLLGLSLGLISARHHDLVYTLGWHTLTDPSQMSSRSIRRQLGHGLVSSLKYTFKIDRRNSPIRPTKGYAFLSTTHFGGLTPDPRSLRFLRQEFDVRCVIPFGFYNTALNLGISAGAVFPWGHGFMNKPSPLPERFYLGGDFSPVCTLGGPITLWGFKTRGLGPTEPQRRSRDGIIDDNDDSSRWDFIGGDLAVTAFADLSFDLPVRWLRDHGIHGHVFAGAGNTAKLTQNEYKHFSPRKFLESFRTSVGCGFVVPTRLFRLEGNFYYILKQNEHDRGKTGFRFSFSAPS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02340 528 Coils Coil 51 71 - -
Gma11g02340 528 MobiDBLite consensus disorder prediction 1 57 - -
Gma11g02340 528 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 18 526 IPR039910 -
Gma11g02340 528 MobiDBLite consensus disorder prediction 18 45 - -
Gma11g02340 528 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 167 526 - -
Gma11g02340 528 Gene3D membrane protein fhac 74 153 - -
Gma11g02340 528 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN ISOFORM 1 18 526 - -
Gma11g02340 528 Pfam Omp85 superfamily domain 182 525 IPR000184 GO:0019867
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02340 Gma-Chr11 38831888 38836524 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02340 K07277 - gmx:100804873 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02340 11 38831888 38836524 Gma11g02340 11 38831888 38836524 ECH
Gma18g00236 18 1902957 1907820 Gma11g02340 11 38831888 38836524 GST
Gma11g02340 11 38831888 38836524 Gma14g00485 14 4596876 4600526 PCT
Gma14g00485 14 4596876 4600526 Gma11g02340 11 38831888 38836524 PCT