Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00235 ATGGCGAACGTGGATGAACTTTTATCTTCCTTAATCTCAGACGTCCACGCCTACACCGGCAAAGACCCTCTTCTTCCATGGCTTCGCGCGATCCGAAAGGTGAAGGACACTCTTCCTCCCAAAACCCTAAAGGAAAAGTTACCCGCGTTCCTGCAGAAATGCGCACACACCTTCGAGCTCGATCGGCGTTACAGAAACGACATGCGCTATCTTCGGGTTTGGCTCCACCTGATGGATTTTGTGGATGATCCAAAAACACTTTTGAGAACGATGGAGACTAATCACATTGGGACAAAACGTTGTGAATTCTACCAAGCGTATGCTCTTTACTACGAGAAAAGCAAGAAGAGCGATGAGGCAGAGAAAATGTACCATCTGGGAGTGAAGAACCTTGCAGAGCCTCTAGATAAATTGCAGAAATCATATGAACAATTTCTTCAACGGATGGAGCGAAAAAATAATAAGAGAATCCAGCATCAGGAAGCAAAAGCTTCCAGGAGGCCTCTGTCTTTAAAGAGCTTCCCTTCTCTTGACAACAAAACTGAGGGAAGCAAAAGCAATGGAGTAGACTGTGTTGAGGGTGTGCAAAAGGGACCCCGAATTGATAATTATGCAGCTAAAGGTGTGGCTGATGATAAAAACATAAAGACTAAGAAGGATGAGCGCAAGAGATTTTGTGGTGATGATACAGTTGTAGTCAAGTTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGATTAGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCCGGGAGCCATTGGAGACTGTTCCATTAGGCAAGAAATCACATAAAAACCATTCAAAAGAAGATCGTAGTACAAAGAACGAGTTTGAGGTTTTGGTTGATGAAAACTTGGACAATGGAATCAAACCATCCGGTTCCTTGTCACTTCGGAACAGGACTGAAGCTAGCCAACCTCACCAAGAACCGCTCCAGATATACATTGATGATGAAGAGACTTCTGAGACCAGTGATGTGAATTTGTTTGAAGGTGGTTGTACTTCATCGGCTTCACAACCAAATGGCTTTGTTTTTCTACGCTCCAAGGATATTCCTTCTAAAAAATCTAGTGATATGGATGCTGATAGCGATCGTAATTCAAAGTTCAGAGAGGATACAGTCGTTTGCAGATTTGTTGGTTCCGCCATTTTGGATGAACCAGAGGTGGAAAATGTTTGCCACCACGGTTTAGTAGACCCCACCATCAACTTGAAAGAAGCTATGGATGACATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAGAAGAACCACCACCAAGCAGGAGAAGGCCCACCAGAGCATTAGGGGAAATGACATTGGTGGGTTTTCAATCCTTGCTGATGATGAGCTCCAGGAACAAGAAGTTCCACCTCCACCACCACCAAAATTGCTAGGAAAGTCCAAGGAATCTGATTTGTTTGAGCCAACTATCCTCACAAAGGAAGCCATAGATGATATAAACAAGATGTTTAACATGCCTCTGGATTTTTAG 1569 0.4334 MANVDELLSSLISDVHAYTGKDPLLPWLRAIRKVKDTLPPKTLKEKLPAFLQKCAHTFELDRRYRNDMRYLRVWLHLMDFVDDPKTLLRTMETNHIGTKRCEFYQAYALYYEKSKKSDEAEKMYHLGVKNLAEPLDKLQKSYEQFLQRMERKNNKRIQHQEAKASRRPLSLKSFPSLDNKTEGSKSNGVDCVEGVQKGPRIDNYAAKGVADDKNIKTKKDERKRFCGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVPLGKKSHKNHSKEDRSTKNEFEVLVDENLDNGIKPSGSLSLRNRTEASQPHQEPLQIYIDDEETSETSDVNLFEGGCTSSASQPNGFVFLRSKDIPSKKSSDMDADSDRNSKFREDTVVCRFVGSAILDEPEVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRRRTTTKQEKAHQSIRGNDIGGFSILADDELQEQEVPPPPPPKLLGKSKESDLFEPTILTKEAIDDINKMFNMPLDF 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00235 522 MobiDBLite consensus disorder prediction 477 496 - -
Gma18g00235 522 MobiDBLite consensus disorder prediction 312 331 - -
Gma18g00235 522 Coils Coil 135 162 - -
Gma18g00235 522 PANTHER OS11G0128700 PROTEIN 4 522 - -
Gma18g00235 522 MobiDBLite consensus disorder prediction 153 193 - -
Gma18g00235 522 Pfam Mad3/BUB1 homology region 1 13 128 IPR013212 -
Gma18g00235 522 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 522 IPR015661 GO:0007094
Gma18g00235 522 MobiDBLite consensus disorder prediction 172 186 - -
Gma18g00235 522 Gene3D - 9 166 - -
Gma18g00235 522 ProSiteProfiles BUB1 N-terminal domain profile. 11 167 IPR013212 -
Gma18g00235 522 MobiDBLite consensus disorder prediction 311 335 - -
Gma18g00235 522 SMART mad3_bub1_i 4 128 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00235 Gma-Chr18 1899270 1901705 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00235 - - gmx:100783816 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00235 18 1899270 1901705 Gma18g00235 18 1899270 1901705 ECH
Gma18g00235 18 1899270 1901705 Gma11g02341 11 38838154 38840590 GST