Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02341 ATGGCGAACGTGGATGAACTCTTATCTTCCTTAATCTCAGACATCCATACCTACACCGGCAAGGACCCTCTTCTTCCCTGGCTTCGCGCGATCCGAAAGGTGAAGGACACGCTTCCACCCAAAACCCTAAAGGAAAAACTACCCGCGTTCTTGCAGAAATGCGCACATACCTTCGAGCTCGATCGACGTTACAGAAACGACATGCGCTATCTTCGGATTTGGCTCCATCTGATGGATTTCGTGGATGATCCAAAAACGCTTTTGAGAACCATGGAGGTTAATCACATTGGGACAAAACGTTGTGAATTCTACCAAGCGTATGCGCTTTACTACGAGAAGAGCAAGAAGTACGATGAGGCAGAGAAAATGTACCATCTGGGAGTGAAGAACCTTGCAGAGCCTGTAGATAAATTGCAGAAATCATATGAACAATTTCTTCAACGGATGGAGCGAAAAAACAATAAGAGAATTCAGCATCAGGAAGCAAAAGGTGCCAGGAGGCCTCTGTCTACAAAAAGCTTCCCTTCTCTTGACAACAAGACTGAGGGAAGCAAAAGCAATGGAGCATGCTGTGTTGAGGGTGGTGTGCAAAAGGGACCCCGAATTGATAATTATGCAGCTAAAGGTGTAGCTGATGATAAAAACGTAAAGACCAAGAAGGATGAGCGCAAGAGATTTCATGGAGACGATACAGTTGTAGTCAAGTTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGACGCATGCCATCATGGATTAGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCCGGGAACCGTTAGAGACTGTTCCATTAGGCAGGAAATCACATAAAAACCATCCAAAAGAAGATCCTAGTACGAAGAACGAATTTGAGGTTTTTGTTGATGAAAACATGGATCATGGAATCAAACCATCAGGTTCCTTGTCACTTCAAAACAGGACTGAAGCTAGCCAACCTCACCCAGAACCGCTCCAGATATACGTTGATGATGAAGAAAATTCCGAGACCAGTGATGTGAATGTGAATCTGTTTGAAGGTAGTAGTACTTCATCGGCTTCACAACCAAATGGTTTTGTTTTTCTACGCCCCAAGGATATTCCTTCTGAAAAATCTAGTGATATGGATGCTGACATCGGTCGTAATTCAAAGTTCAGAGAGGATACAGTCGTTTGCAGATTTGTTGGTTCTGCCATTTTGGATGAACCAGAGGTGGAAAATGTTTGCCACCACGGTTTAGTAGACCCCACCATCAACTTGAAGGAAGCTATGGATGACATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAGAAGAAGAACCACCACCAAGCAAGAGAAAGCCCCCCAGAGCAATAGGGGAAATGACTTTGGTGGGTTTTCAATCCTTGTTGATGATGAGCACCCGGTGCAACAAGTTCCACAACCACCACCACCAAAATTGCAAGAAAAATCCAAGGAATCTGATTTGTTTGAGCCAACTATGCTCACAAAGGAAGCCATAGACGATATAAACAAGATGTTTAACATGCCTCTGGATTTTTAG 1581 0.4352 MANVDELLSSLISDIHTYTGKDPLLPWLRAIRKVKDTLPPKTLKEKLPAFLQKCAHTFELDRRYRNDMRYLRIWLHLMDFVDDPKTLLRTMEVNHIGTKRCEFYQAYALYYEKSKKYDEAEKMYHLGVKNLAEPVDKLQKSYEQFLQRMERKNNKRIQHQEAKGARRPLSTKSFPSLDNKTEGSKSNGACCVEGGVQKGPRIDNYAAKGVADDKNVKTKKDERKRFHGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVPLGRKSHKNHPKEDPSTKNEFEVFVDENMDHGIKPSGSLSLQNRTEASQPHPEPLQIYVDDEENSETSDVNVNLFEGSSTSSASQPNGFVFLRPKDIPSEKSSDMDADIGRNSKFREDTVVCRFVGSAILDEPEVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRRRRTTTKQEKAPQSNRGNDFGGFSILVDDEHPVQQVPQPPPPKLQEKSKESDLFEPTMLTKEAIDDINKMFNMPLDF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02341 526 Pfam Mad3/BUB1 homology region 1 11 128 IPR013212 -
Gma11g02341 526 Gene3D - 9 165 - -
Gma11g02341 526 MobiDBLite consensus disorder prediction 314 333 - -
Gma11g02341 526 Coils Coil 135 162 - -
Gma11g02341 526 MobiDBLite consensus disorder prediction 453 505 - -
Gma11g02341 526 MobiDBLite consensus disorder prediction 315 330 - -
Gma11g02341 526 SMART mad3_bub1_i 4 128 IPR013212 -
Gma11g02341 526 ProSiteProfiles BUB1 N-terminal domain profile. 11 167 IPR013212 -
Gma11g02341 526 MobiDBLite consensus disorder prediction 153 185 - -
Gma11g02341 526 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 526 IPR015661 GO:0007094
Gma11g02341 526 PANTHER OS11G0128700 PROTEIN 4 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02341 Gma-Chr11 38838154 38840590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02341 - - gmx:100806627 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02341 11 38838154 38840590 Gma11g02341 11 38838154 38840590 ECH
Gma18g00235 18 1899270 1901705 Gma11g02341 11 38838154 38840590 GST